KEGG   Corynebacterium sphenisci: CSPHI_05505
Entry
CSPHI_05505       CDS       T05122                                 
Name
(GenBank) polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
csph  Corynebacterium sphenisci
Pathway
csph03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csph00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CSPHI_05505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csph03019]
    CSPHI_05505
   03016 Transfer RNA biogenesis [BR:csph03016]
    CSPHI_05505
Enzymes [BR:csph01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CSPHI_05505
Messenger RNA biogenesis [BR:csph03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CSPHI_05505
Transfer RNA biogenesis [BR:csph03016]
 Prokaryotic type
  tRNA degradation factors
   CSPHI_05505
SSDB
Motif
Pfam: RNase_PH PNPase S1 KH_1 RNase_PH_C KH_2
Other DBs
NCBI-ProteinID: APT90583
UniProt: A0A1L7CXL8
Position
1164189..1166420
AA seq 743 aa
MSDNTQYEYEDDFSDIVETVAVIDNGDFGKREVRFETGQLALQADGAVTAYLDDDTMMLA
TTCASSKPREHLDFFPLTVDVEERMYAAGRIPGSFFRREGRPSQDAILACRLIDRPLRPT
FVKGLRNEIQIIITVLSLDPKDMYDVVAINAASAATQLSGLPVSGPVGGVRMALVADEKH
RDGAWVAFPTQEQHESALFEIVVAGRLTGDGDGADNVAIMMVEAGATEGVTGLIAAGGPA
PTESVVAAGLEAAKPHIAELCRAQRALAEEAAGEVREFPLYPAYAEEVHAAVEKLARKKL
PKLLRTPGKQERDDATNEHMAEVVDKLAEDFPERENEIRNAYNAVMKSVVREMILAEGYR
IDGRATDAIRDLGVEIELIPRAHGSALFERGETQILGVTTLDMMKMEQQIDSLSPVDHKR
YMHHYNFPPYSTGETGRVGSPKRREVGHGALAERALLPVLPTREEFPYAIRQVSEALGSN
GSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGEVDGETRYVALTDILGAEDAFGDM
DFKVAGTADYITALQLDTKLDGIPSKVLADALAQAKDARETILAVMEEAIDGPDEMSPLA
PRITTITVPPSKIGEVIGPKGKIINGITEETGADVSIEDDGTVYVSATSGEAAEAAIEKI
NAIANPQLPKVGERYLGTVVKTTAFGAFVSLVPGRDGLVHISKLGDGKRIDKVEDVVTVG
DKLQVEIADIDNRGKISLVPVKE
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgagcgacaacacccaatacgagtacgaggacgacttctccgacatcgtcgagacggtc
gccgtcatcgacaacggggacttcggcaagcgcgaggtgcgcttcgagacgggccagctg
gccctgcaggccgacggggcggtcaccgcctacctcgacgacgacacgatgatgctggcc
accacctgcgcatcgagcaagccccgggagcacctggacttcttccccctcaccgtcgac
gtggaggagcggatgtacgccgccgggcgtatcccgggctccttcttccggcgggagggc
cggcccagccaggacgcgatcctggcctgccggctgatcgaccggccgctgcggcccacc
ttcgtcaagggcctgcgcaacgagatccagatcatcatcaccgtgctgagcctggatccg
aaggacatgtacgacgtggtggcgatcaacgccgcctccgcggccacccagctctccggg
ctgccggtgtccggccccgtcggcggggtgcgcatggcgctggtcgccgacgagaagcac
cgcgacggcgcctgggtggccttccccacccaggagcagcacgagtccgcgctgttcgag
atcgtcgtcgccggccggctcaccggcgacggcgacggcgccgacaacgtggccatcatg
atggtcgaggccggcgccaccgagggcgtcaccggcctcatcgccgccggcgggcccgcg
cccaccgagtccgtggtggccgccggcctggaggccgccaaaccgcatatcgccgagctg
tgccgcgcccagcgcgccctggccgaggaggccgccggcgaggtccgcgagttcccgctg
tacccggcctacgccgaggaggtgcacgccgcggtggagaagctggcccgcaagaagctg
ccgaagctgctgcgcacccccggcaagcaggagcgcgacgacgccaccaacgagcacatg
gccgaggtggtggacaagctcgccgaggacttcccggagcgggagaacgagatccgcaac
gcctacaacgcggtgatgaagtccgtggtgcgggagatgatcctcgccgagggctaccgc
atcgacggccgcgccaccgacgcgatccgggacctgggcgtggagatcgagctcatcccg
cgcgcccacggctccgccctgttcgagcgcggcgagacccagatcctgggcgtgaccacc
ctggacatgatgaagatggagcagcagatcgactcgctgagccccgtcgatcacaagcgc
tacatgcaccactacaacttcccgccgtactccaccggcgagaccggccgggtgggctcc
ccgaagcgccgcgaggtcggccacggggcgctcgccgagcgcgcgctgctgccggtgctg
cccacccgcgaggagttcccctacgccatccggcaggtctccgaggcgctgggctccaac
ggctcgacctcgatgggctcggtgtgcgcctccacgctgtcgctgtacaacgcgggcgtg
ccgctgaaggccccggtcgcgggcatcgcgatgggcctggtctccggcgaggtggacggg
gagacccgctacgtggcgctgaccgacatcctcggcgccgaggacgccttcggcgacatg
gacttcaaggtcgccggcaccgcggactacatcaccgccctgcagctggacaccaagctc
gacggcatcccctcgaaggtgctcgccgacgccctggcccaggccaaggacgcccgggag
accatcctcgcggtgatggaggaggccatcgacggccccgacgagatgagcccgctggcc
ccgcggatcaccaccatcaccgtgccgccctcgaagatcggcgaggtgatcgggcccaag
ggcaagatcatcaacgggatcaccgaggagaccggcgcggacgtgtccatcgaggacgac
ggcaccgtgtacgtctcggcgacctccggggaggccgcggaggccgcgatcgagaagatc
aacgcgatcgccaacccgcagctgcccaaggtcggagagcgctacctgggcaccgtggtg
aagaccaccgccttcggcgccttcgtctccctggtgcccggccgcgacggcctggtgcac
atctccaagctcggcgacggcaagcggatcgacaaggtcgaggacgtggtcaccgtcggc
gacaagctccaggtggagatcgccgacatcgacaaccgcggcaagatctcgctggtcccg
gtcaaggagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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