KEGG   Capnocytophaga sputigena: CGC55_02805
Entry
CGC55_02805       CDS       T05393                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
cspu  Capnocytophaga sputigena
Brite
KEGG Orthology (KO) [BR:cspu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cspu03032]
    CGC55_02805
   03036 Chromosome and associated proteins [BR:cspu03036]
    CGC55_02805
   03400 DNA repair and recombination proteins [BR:cspu03400]
    CGC55_02805
DNA replication proteins [BR:cspu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CGC55_02805
Chromosome and associated proteins [BR:cspu03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CGC55_02805
DNA repair and recombination proteins [BR:cspu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CGC55_02805
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_1 DUF2267 NTPase_P4 TrbI_Ftype SasG_E
Other DBs
NCBI-ProteinID: ATA83504
UniProt: A0A2A3N466
Position
588735..589013
AA seq 92 aa
MNKTELIDAIAAEAGLTKADAKKAVEAFFSNVEKSLKQGKKVAIVGFGSWSVTKKEARDA
RNPRTGAVIKVPAKKVVKFKAGTELSESVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaatcgatgcaattgctgcagaagctggcttaacaaaagctgat
gctaaaaaagcagtagaagcgttcttttcaaacgttgaaaagagccttaaacaaggtaaa
aaggtagctatcgtaggcttcggatcttggtcagtaactaagaaagaggcgagagatgca
agaaatcctcgtactggtgcagttatcaaagttcctgctaagaaagtagtaaaattcaaa
gctgggactgaactttctgaatcagtaaacaaaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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