KEGG   Clostridium scatologenes: CSCA_0208
Entry
CSCA_0208         CDS       T03803                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
csq  Clostridium scatologenes
Brite
KEGG Orthology (KO) [BR:csq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csq03021]
    CSCA_0208
Transcription machinery [BR:csq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CSCA_0208
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE Sigma70_ECF DUF1492 HTH_16 HTH_40
Other DBs
NCBI-ProteinID: AKA67333
UniProt: A0A0E3JY94
Position
233957..234490
AA seq 177 aa
MNDIDTVIKAQKGDDIAFSELIECHKENLYKIAFAYLKNEEEALDIVSDTIYKVYMDINK
LKNPKFFKTWITRILINNSINSLKKNRRVILIDEYEKIESFNISNLDIETDIPKCIDLYN
AIDSLNIKSKTIIILKYFQDMTISEISNTLEIPEGTVKVYIHRALKKLRIQLREEFV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaatgatattgatacagtgattaaagctcaaaaaggggatgatatagcttttagtgaa
ttaatagagtgtcataaagaaaatctttataaaatagcctttgcttatttaaaaaatgaa
gaagaagctttagatattgtaagcgataccatatataaagtttatatggatataaataaa
ttaaaaaatccaaaattttttaaaacttggattacaagaatattaataaataattctata
aatagtttaaagaagaataggagagtcattttaattgatgaatatgaaaaaattgaaagt
tttaacattagtaatttagatatagaaacagatatacctaagtgcattgatctttataat
gctattgatagtttaaatataaaatcaaaaactataattattttaaagtactttcaagat
atgactatttctgaaatatctaatactcttgaaattcctgaaggaactgtaaaagtttat
atacacagagctttaaaaaaattaagaattcagctgagggaggagtttgtttaa

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