KEGG   Clostridium saccharoperbutylacetonicum: Cspa_c04560
Entry
Cspa_c04560       CDS       T02467                                 
Symbol
rluB1
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
  KO
K06183  16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Organism
csr  Clostridium saccharoperbutylacetonicum
Brite
KEGG Orthology (KO) [BR:csr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csr03009]
    Cspa_c04560 (rluB1)
Enzymes [BR:csr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.19  16S rRNA pseudouridine516 synthase
     Cspa_c04560 (rluB1)
Ribosome biogenesis [BR:csr03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Cspa_c04560 (rluB1)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 Glyco_transf_52 53-BP1_Tudor
Other DBs
NCBI-ProteinID: AGF54274
UniProt: M1M8M0
Position
complement(527522..528238)
AA seq 238 aa
MERLDKIISNLGYGSRKDVKSFAKKGIIEVDGVIVKDNGMLVDPEKSIIKINGEQILYRK
YIYLMMNKPDGVISATHDNKDETVIDLLELEHQVFEPFPVGRLDKDTVGLLLLTNDGELN
HRLIAPKWHVDKVYYAKIDKKVDEKDVAAFKNGITLDDGYKCMEAKLEILSNDDNGSDIR
VTIQEGKYHQVKRMFEAVDKKVVYLKREEFGGLLLDPTLEEGEYRELTDDELSLLRSY
NT seq 717 nt   +upstreamnt  +downstreamnt
ttggaaagattggataagataatttctaatttaggatatggaagtagaaaagatgttaag
tcttttgcaaaaaaaggcattatagaagttgacggtgtaatagtaaaggataatggaatg
cttgttgacccagaaaaatccattataaaaataaacggtgaacaaatattataccgcaaa
tacatatatcttatgatgaataaacctgatggagtgatttctgcaactcatgataacaaa
gatgagactgtaattgacttattagaattagaacatcaagtatttgagccatttccagtt
ggcagattagataaagatactgttggattattactgttaacaaacgatggtgaacttaat
catagattaatagctcctaaatggcatgttgacaaagtatattatgcaaaaattgataaa
aaagtagatgaaaaagatgttgctgcttttaaaaatggtattactttagatgacggttat
aaatgtatggaggcaaagcttgaaattctatctaacgatgataatggctcagacatcaga
gtgacaatacaagaaggtaaatatcatcaagtaaaaagaatgtttgaagctgttgataaa
aaagtagtttaccttaaaagagaagaatttggtggtcttctattggatcctactttagaa
gaaggcgaatatcgtgaattaactgatgatgaattaagccttttaagaagctattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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