KEGG   Clostridium saccharoperbutylacetonicum: Cspa_c55180
Entry
Cspa_c55180       CDS       T02467                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
csr  Clostridium saccharoperbutylacetonicum
Pathway
csr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cspa_c55180 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csr03400]
    Cspa_c55180 (uvrB)
DNA repair and recombination proteins [BR:csr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cspa_c55180 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cspa_c55180 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD SWI2_SNF2 AAA_30 AAA_22 UB2H DUF87
Other DBs
NCBI-ProteinID: AGF59263
UniProt: M1MT30
Position
complement(6176068..6178035)
AA seq 655 aa
MGEFKIQSKFKPTGDQPQAIDKLVNSLNNKHRGQTLLGVTGSGKTFTMANVIERVQRPTL
ILAHNKTLAAQLCSEFKEFFPDNIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTISLRTGMEKERNEVIKELIEIQY
ERNDIDFSRGTFRVRGDSLDIIPASYSNKGIRIEFFGDEIDRIREFDVLTGTIIGERNHV
AITPASHFATSRETIDKSIGRIEEELEERLRELNAQDKLLEAQRLRQRTNYDIEMIKEMG
YCSGIENYSRILDGRAGGTPPKTLIDYFPEDFLMFIDESHVTLPQVRAMYAGDRSRKNTL
VDYGFRLPCAYDNRPLKFEEFQEKINQVVFVSATPSAYEIDNSEEIAEQIIRPTGLLDPE
IVIKPIKGQIDDLYGEINKTVERGFRILITTLTKRMSEDLTKYLTELGVKTTYMHSDIDT
IERMKIIRDLRLGEYDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESKVIMYADNITKSMDKAMKETERRRAIQKEYNDKNGIVPTTIIKEVREVIEATKI
AEEVEEYKVDNKKKLNKKEKDKLIKQLTEEMLLAAKNLQFERAAELRDIINELKA
NT seq 1968 nt   +upstreamnt  +downstreamnt
ttgggagaatttaaaatacagtctaaatttaaaccaacaggagatcagccacaggctatt
gataagttggttaactcattaaacaataaacatagaggtcagacattgcttggagtaact
ggatcgggaaaaacatttactatggcaaatgtaatagaacgagttcaaagacctactttg
attttagctcataataagactctagcagcacaattatgttcggaatttaaagaatttttt
cctgataatatagttgaatattttgtttcatattatgattattatcaaccagaagcatat
gtgcctcaaacagatacgtttattgaaaaagatgcatctataaatgatgaaattgataaa
ttaagacactcagccacatcagcacttttcgaaagaagggatgtaattattgtagcatct
gtttcttgtatatatggattaggtaatccagatgaatataagaaattaaccataagtctt
aggactggaatggaaaaagagagaaatgaagttattaaagaattaattgaaattcaatat
gagagaaatgatatagacttttctagaggaacctttagagttagaggagattctttagat
ataattcctgcatcctattcaaataaaggtatcagaatcgagttctttggggatgaaatt
gatagaataagagaatttgatgttttaactgggacaattatcggagaaagaaatcatgtt
gctataactcctgcctcccattttgctacttcaagggaaactatcgataaatctattggt
agaattgaagaggaattagaagaaagattaagggaacttaatgctcaagataagctttta
gaagcacaaagattaaggcaaaggacaaactatgacattgaaatgattaaagaaatggga
tattgtagtggaattgaaaattattctagaatattagatggtagagcgggtggaactccg
cctaagacactaatagattattttccagaagactttttaatgtttattgatgaaagtcat
gtaactttaccacaagttcgagcaatgtatgcaggagacaggtctagaaagaatacatta
gttgattatggatttagacttccgtgtgcatatgataatcgacctttaaaatttgaagaa
tttcaagagaaaattaatcaagtggtttttgtaagtgcaactccatctgcctatgaaata
gataattcagaagaaattgcagaacaaattataagaccaacaggattattggatccagaa
atagttataaaaccaataaaaggtcaaattgacgacttgtatggagaaattaataaaact
gtagaacgtggatttaggattttaataacaactctgactaagcgtatgtcagaagattta
actaaatatttgacagagcttggtgtaaaaactacttatatgcattctgatattgatact
attgaaagaatgaaaattataagagatttgagacttggagaatatgatgtattagttgga
atcaatcttttaagagaagggttggatataccagaggttgctttagttgcaattttagat
gctgataaagaaggcttcttaagatcagaaacttcattgattcaaacaataggtagggca
gcaagaaattctgagagtaaagttataatgtatgcagataatataactaaatctatggat
aaggctatgaaagaaacagaaagaagaagagcaatacaaaaggaatataatgataaaaat
ggaattgttccaactacaataattaaagaggtaagagaagtaatagaggcaacaaaaatt
gctgaagaagttgaagaatataaagttgataataagaagaaacttaataaaaaagaaaaa
gataagttgattaaacaacttacagaagaaatgcttttagcagctaaaaatcttcaattt
gaaagagcagcagagcttagagatataataaatgagttgaaagcttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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