KEGG   Candidatus Caldarchaeum subterraneum: CSUB_C0002
Entry
CSUB_C0002        CDS       T02904                                 
Name
(GenBank) replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
csu  Candidatus Caldarchaeum subterraneum
Pathway
csu03030  DNA replication
Brite
KEGG Orthology (KO) [BR:csu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CSUB_C0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csu03032]
    CSUB_C0002
DNA replication proteins [BR:csu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     CSUB_C0002
SSDB
Motif
Pfam: AAA Rad17 AAA_22 RuvB_N AAA_16 AAA_assoc_2 DUF815 AAA_2 AAA_14 TniB AAA_33 AAA_5 Bac_DnaA AAA_30 IstB_IS21 RFC1 AAA_7 ATPase_2 RsgA_GTPase MMR_HSR1 AAA_28 AAA_24 MCM4_WHD DNA_pol3_delta NACHT TsaE PPV_E1_C AAA_29 nSTAND3 Roc
Other DBs
NCBI-ProteinID: BAJ49871
UniProt: E6N450
Position
complement(1236..2465)
AA seq 409 aa
MTQLWTEKHRPRKVSEIVGNKEAVQAFLEWMAGWEKGKPSKKAALLYGPAGVGKTSLVHA
YASEKGYEVIETNASDFRTRENIERIVGAASGMASLTMGQRKIILVDEVDGIDARADAGA
VTSLADIISKTHVPVVLVANDPWDPRLAPLRDACLMIQFRRIPKPSVAAHLKKIAAAENV
RVPEDVLRRIVENSEGDLRSAINDLQMASAALEMGLVTGSRDRKDEIFTALATIFNAKSF
NTAQEAARNIDIDHSELMQWILENAPQQLSPTDLAEALENLAKADLYLQRINTRQNWQLL
RYAVPMMTAGVALSRKTSPSKFVKFTYPEAIKFLGRTKSIRETLNSISEKVGKKLHMSAR
KARTEILPYLKIIMSHDGKELAEYFELSPEETQYLRGGEVKKSRAKGRG
NT seq 1230 nt   +upstreamnt  +downstreamnt
ttgacacagctctggacagaaaaacacaggcccagaaaagtctccgaaatcgtggggaac
aaagaggctgtccaagcatttctagaatggatggcgggctgggagaagggcaaaccctcc
aaaaaagcagctctcctgtatgggccagccggcgtcggaaaaacttctctcgtgcatgcc
tacgcgtctgaaaaaggatacgaagttatagagacaaacgccagcgactttcggacacgg
gaaaacatcgagagaatcgtgggagctgcgtcggggatggcttcgcttaccatgggccag
cgaaaaatcatactcgtcgacgaggtcgacggcatagacgcgagagcggatgcgggtgct
gtcacaagccttgcagacatcatatccaaaacacatgtccccgttgtccttgttgcaaac
gacccatgggacccgcggctggcccccctaagagacgcatgcctgatgatacagtttagg
agaattccaaagccatcggtggctgcgcatctcaagaaaatagctgcggccgagaatgta
agagtccccgaggatgttctacgaaggattgtggagaactctgaaggagacctaagatcc
gcgataaacgatttgcagatggcttcggccgctctcgagatgggtttggtgacgggatca
agggatagaaaggatgagattttcacagccctggccacaatctttaacgctaaatccttc
aacactgctcaggaggcggcgcgcaacatcgacatcgaccactcggagctaatgcagtgg
atacttgagaacgcgcctcagcagctctcgccaaccgacttagccgaggcccttgaaaac
ctcgccaaagcagacctctatctccaaagaataaacacgcggcaaaactggcagcttctc
cgctacgccgtgccgatgatgaccgcgggtgtcgcactatcccgaaaaacatcaccatca
aaattcgtcaaattcacctacccagaggccatcaagtttctcggccgaacaaaatccata
cgtgaaacactaaacagcatatcggaaaaagtagggaaaaaacttcacatgtccgcgcgg
aaagcgagaaccgagatactgccctacctcaaaataatcatgtcccatgatggaaaagag
ctggcagagtatttcgaattgtctccagaggagactcagtatcttcgcggcggcgaagtg
aagaagagccgtgctaagggccgtggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (41)   

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