KEGG   Cucumis sativus (cucumber): 101203145
Entry
101203145         CDS       T02486                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101203145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101203145
   03041 Spliceosome [BR:csv03041]
    101203145
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101203145
Spliceosome [BR:csv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101203145
SSDB
Motif
Pfam: FmiP_Thoc5 Cortex-I_coil
Other DBs
NCBI-GeneID: 101203145
NCBI-ProteinID: XP_004141378
UniProt: A0A0A0KZS2
Position
4:complement(24342764..24347771)
AA seq 815 aa
MDEEIEEGMLIEDETEPLPPDSETGKISPFEMLRESKSCVEDIVTKMLSIKKHGESKTQL
RELVTQMFLHFVTLRQANRSILLEEDRVKSETERAKAPVDFTTLQLNNLMYEKSHYVKAI
KACKDFKSKYPDIELVSEDEFFRDAPENIKNSMRSKDSAHNLMLQRLDYELFQRKELCKR
RDELEQHKKGLLEVIANRKKFLSSLPSHLKSLKKASLPVQNQLGILQTKKLKQHQLAELL
PPPLYVIYSQFLAQKEAFGENIELEIVGSIKDAQAFARHQANKETGASNNAESNKLEDDA
PDEDDDGQRRRKRPKKIPAKVNIEHAGIYQVHPLKIILHIYDSETCEPKSMKLLSLKFEC
LLKLNVICVGIEGSHEGPENNILCNLFPDDTGLELPHQSAKLVVGETLAFSDKRTSRPYK
WAQHLAGIDFLPELPPLVSAQESVSGEPVRGDIVSGLSMYRQQNRIQTVVQRLRSRKKAQ
LALVEQLDSLEKLKWPVLTCDEVPWVSHKPSCCLQGWSLVGYSTKQASSLTTMEKEKVQD
PVDVDMVGKSGISREEIDSAREDGELPALVSSTPILNNPEVRTPNLEHSKQLTLISKSIT
PQTNYSRMLSFNKHDEDYELMIDVDSDQDDPVQAELAADDVASVPSNNITTKKWIDYGSK
EYCLILTRNTERPTKNLKLQAKIKISMEYPLRPPVFTLNLYTMNSEENREECDDSDWYNE
LRAMEAEVNLHILKMLPLDQENYILSHQICCLAMLFNYCISEASLFSERRKSSSVIDIGL
CKPVSGSLHARSFRGRDRRKMISWKDIECTPGYPC
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggacgaggagatagaggaaggaatgctcatagaagacgagaccgagcccctgccgcca
gacagcgaaacgggcaaaatttctccctttgaaatgctccgagagagcaaaagttgtgtg
gaagacatcgtcaccaagatgctctccatcaagaagcatggcgagtctaaaactcagctc
agagaactcgttacccagatgttccttcacttcgtaactcttcgccaggcaaatcgctct
attttgctggaagaggatcgagtcaaatctgaaacagagcgagcaaaagctccagttgac
ttcacgactctgcaacttaacaacttgatgtatgaaaagagtcactatgttaaagcaata
aaggcctgcaaagacttcaaatccaagtatcctgatattgaacttgtgtctgaggatgag
tttttccgggatgcacccgaaaacattaagaactccatgaggtcgaaggacagcgcgcac
aatctgatgctacagaggcttgactatgagcttttccagcgcaaagaactttgcaaacgg
cgagatgaacttgaacagcataagaaaggcctactagaagtcattgctaatagaaagaaa
ttcttgtcaagtcttccctcacacctcaagtccttaaaaaaggcatccttgcccgtacaa
aatcagttggggatattacagacaaaaaaattaaagcaacaccaactagcagagctactt
ccacctcctctttatgtaatctactcgcagttcttggcacaaaaggaagcctttggcgaa
aatatagaattggagatagtaggaagtatcaaagatgcccaagcttttgcacgccatcaa
gcgaataaggaaactggtgcatcaaacaacgctgagagcaataagttggaggatgatgca
cccgatgaagacgatgatggccaaaggaggagaaaacggccaaagaagattccagctaag
gtgaacattgagcatgcagggatatatcaagttcatcccctaaagatcatccttcatata
tatgacagtgaaacatgtgaacccaagtcaatgaaattgctctctctgaagtttgaatgc
ttgttaaagttgaacgttatttgtgttgggattgaaggatctcatgaaggtcctgagaat
aacatcttatgcaacttgttccctgatgatactggccttgagctgcctcaccagtcagcc
aagcttgttgttggtgaaacacttgcatttagtgataagagaacctctcgaccatataag
tgggcacaacatttggctgggattgattttttgccagaattgccaccgttggtgagtgca
caagaatctgtcagtggtgaacctgttagaggtgatattgtatcaggcctttcaatgtat
cggcagcagaaccgaatacagacagtagtgcaaagattacgctctcggaaaaaggctcag
ctggctcttgtggaacagcttgattcacttgaaaaactcaaatggccagttctgacgtgt
gatgaagtcccttgggtttcacataaaccttcatgctgtttgcaaggttggtcgcttgta
ggttactctacaaagcaggcatcatctttgactacaatggagaaagagaaagttcaggat
cctgtagatgttgacatggttggaaaatctggcatttcaagagaagagattgacagtgct
agggaagatggagaactccctgctcttgtttcatctacgcctatcttaaataatcctgaa
gttagaacacccaatcttgagcattccaaacagttgactttaatttctaaaagcattaca
cctcaaactaattactctaggatgctaagtttcaataaacatgatgaagattatgagttg
atgatagatgttgacagtgaccaggatgatcctgtgcaagctgagcttgcagcagatgat
gtagcatctgttccttccaacaacataacaacaaagaaatggatagattacgggtccaag
gaatattgccttattcttaccaggaacactgagcgacctaccaaaaatcttaaattgcaa
gccaagattaaaatcagcatggagtaccctcttaggcctcctgtcttcactttgaatctc
tacacgatgaattctgaagaaaaccgtgaggagtgtgacgactctgattggtataacgaa
cttcgagccatggaagctgaggtgaatctccatatacttaagatgctgcctttggatcaa
gagaactatatattgtctcatcagatttgctgtcttgctatgctgtttaactactgcatc
agcgaggcatctcttttctcggaaaggagaaagagtagttccgtaattgacattggattg
tgcaaacctgttagtggtagtttacatgccagatcgtttagaggaagggatcgtagaaag
atgatatcctggaaagatattgaatgtactcctggctatccttgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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