KEGG   Cucumis sativus (cucumber): 101205797
Entry
101205797         CDS       T02486                                 
Name
(RefSeq) uncharacterized protein LOC101205797
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csv03016]
    101205797
Enzymes [BR:csv01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     101205797
Transfer RNA biogenesis [BR:csv03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    101205797
 Prokaryotic type
    101205797
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 101205797
NCBI-ProteinID: XP_004138518
Position
6:187704..190931
AA seq 355 aa
MRDIKIEFIEREISELKTQRMRCWAVGSPVLPPISLPLSPIIPSPNGASSSSSRGFPNAE
DDASYIKEPSFPCFKWRLLIAYDGTRYAGWQYQRSPPTIQCLIEEALIGATKLERKDLHL
VGASRTDKGVHAWGQVAHFVTPFNYDSLESVHAALNGLLPVDIRVREMSPAVPDFHARFS
TLSKVYHYKIYSGTIMDPFQRCYTYHCVYKLNYAAMKEAANYFVGKHDFSAFTNAAHNDR
VVNPVKVIFRFDVIEMGALVQLEVEGSGFLYRQVRNMVGLLVQIGKEALPPEVVPKILAS
RDRRELAKYASGVPPQGLCLVSINYKEDHLKLPSDCPGTSFGRTRSVSKCKVPFY
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgagagatatcaaaattgaatttatagaaagggaaatctctgaattgaaaactcaacgg
atgaggtgctgggcggtgggttcgcctgttcttcctccaatttcccttcccctttcacca
atcattccatctccaaatggcgcttcatcttcctccagtcgtggattcccgaatgcggag
gatgatgcctcttatatcaaagagccttctttcccatgcttcaaatggcggttgctcatc
gcttatgacggtactcgatatgcaggctggcaatatcagaggtcaccacccactatccag
tgcctcattgaagaagccttgattggagcaacaaagcttgaaaggaaggatcttcattta
gttggtgcaagcagaacagataaaggagtacatgcctggggtcaggtggctcactttgtt
acgccatttaactacgatagcttggaaagcgttcatgctgcactgaatggccttcttcct
gtggatataagagttcgagagatgagtcctgctgtacccgattttcatgctcggttttct
acgttaagcaaggtttatcactacaagatatatagtggcacaatcatggatccatttcag
cgttgctacacttaccactgtgtttataaactcaactatgcagccatgaaagaagctgca
aattatttcgtcggaaagcatgatttttctgcttttacgaatgcagctcataacgatcga
gtggtaaatccagtgaaggtcattttccgttttgatgtgatagaaatgggagctcttgtg
cagctagaagttgagggttctgggttcttgtatagacaagttcggaatatggttggcttg
ttggttcaaattggaaaggaagcacttcctcctgaggttgttcctaagattttggcatct
cgagatcgcagagagcttgctaagtatgcttcgggcgttcctccccagggactgtgtctt
gtgagtattaattataaagaggaccatttaaagcttccatccgattgccctgggactagt
tttggtaggactcgtagtgtgagcaaatgtaaagtccctttttattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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