KEGG   Cucumis sativus (cucumber): 101206316
Entry
101206316         CDS       T02486                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101206316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101206316
   03036 Chromosome and associated proteins [BR:csv03036]
    101206316
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101206316
   Coactivators
    SAGA/TFTC/STAGA complex
     101206316
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     101206316
SSDB
Motif
Pfam: TAF4 RST
Other DBs
NCBI-GeneID: 101206316
NCBI-ProteinID: XP_031738518
Position
3:complement(40206197..40215694)
AA seq 895 aa
MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDVQAVAQTSESDAAFPQGNNNGSS
TLSLQASSQSENSETHVQQNQNFRLKQEQHSSLMELERSVPENQQQHNSAPFQVSKNQPQ
ADREQGEGEQVSAQFSQTAGLQVSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQSMVA
EQANNPLNRSKQVPFASLMPVLMPQLDKDRGMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
DQMLRLAVCQVQSQPPPSVRQLPPRMPSMGPGTPNFSDPRPFTQLHPKGMNPPAVQSYMP
SPASQGRSSSGYPAMDKNMQSLREVEQRPDCNGNQITSSSTSTIQDRERSSVSVPGLEKQ
QLHFQQKSFNMYGNSGNYHPYTGSNMNASSLSLKPQPHEGQVKQISQQAPNFDRQVTIND
SKRVQAGSVPHLHNNLTSQQNSWKSSTSKEQTITSYVKQEPSDQVSEQSKTQHSNLQGLS
SIPSMQAEQVNTNPGIAKDPFDKQTSKMGFPTPNNVMPPTSTNAANSISSDSSSLHESNA
AVPSATTPGMQNRAPQKKAAVGQKKPLEALGSSPPLSSKKQKVSGAFADQSIEQLNDVTA
VSGVNIREEEEQLFSSAKEDSRASEASRRVVQEEEERLLLQKAPLQKKLVEIMAKCGLKG
MSNDVEKCLSLCVEERLRGVISNLIRLSKQRVDAEKPRHRTVITSDVRQQITLVNQKARE
EWEKKQAEEEKLRKLNDPDDGSGVSGDKEKDEGRMKSLKVNKEEDDKMRTTAANVAARAA
VGGDDMLSKWQLMAEQARQKREGGVDSASSSQAGKDAVRKSSSAAGRHGKDNLEGERKGT
SRKFGRNQTNATQTKVARSISVKDVIAVLQREPQMSRSTTIYRLFNRVHPESTGE
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggacccatctattatgaagcttctggaggatgacgaggatgaatcaatgcattcaggt
gcagctgtggatgcttttcaggctgccttgaatagagacatagaaggcgatgttcaggct
gttgcccagacgtctgaatctgatgcagccttccctcaggggaacaacaatggttcttct
accctctcgttacaagcttctagtcaaagtgaaaattctgaaactcatgtgcaacaaaat
caaaattttcgtttaaagcaagaacaacattcatctctgatggagctagagcgatcagta
cctgaaaatcagcagcaacataattctgccccctttcaagtttcaaagaatcaaccccaa
gcagatcgtgaacaaggggagggagaacaagtttctgctcagttttctcaaacagctggg
ctgcaagtttctgaaaaagctccaatccttgtgaatgactcaaacagaatgcagaatcgg
gacaatgaatctcaatacttgaagttacaaaagatgagtaatcagcaatcaatggttgca
gaacaggcaaataacccactaaaccgtagcaaacaggttccttttgcttctttgatgcct
gtattgatgcctcagcttgataaggacagaggcatgcagcttcagactttatttaacaga
ttgaagagaaatgaaatgaacaaagatgattttattcggctcatgcggggcgttgtgggc
gatcagatgctcagattagcagtttgtcaagtacaatcacagcctccaccttcggtaagg
caacttcctcctagaatgccatctatgggtcctgggacaccaaatttctctgatccacga
ccatttacacaacttcatccaaaaggcatgaatcctcctgcagttcaatcatacatgccc
tctccagcatcccaagggcggagtagttcaggctatcctgccatggacaagaatatgcaa
tctttacgagaagtagaacagcgacctgattgtaatggaaatcaaataacttcatccagt
acaagcaccatccaagatagggaacgctcctcagtttctgttccaggacttgagaagcag
cagttacactttcaacagaaatctttcaacatgtatggaaacagtggtaattatcaccca
tatactgggtcaaacatgaatgcctcttcattgtctcttaaacctcaacctcacgagggt
caagtgaagcagatttcgcagcaggctcccaattttgacaggcaagttacaataaatgat
tccaagcgagtccaggctggaagtgttccacacttacataataacttaacttcacaacaa
aattcatggaaatcatcaacaagtaaagagcagaccataacaagttacgttaaacaagaa
ccttctgatcaggtttcggagcagagcaaaacccaacattcaaatttgcagggcttgtct
tctattcctagcatgcaggctgaacaagttaacacaaaccctggaatagcgaaggaccct
tttgacaaacaaacttctaaaatgggttttcctacaccaaataatgttatgcctcctaca
tcaaccaatgccgcaaattcaatttcttctgattcaagctctctacatgagtccaatgct
gcggttccttctgcaactactcctggaatgcaaaatagggcaccacaaaagaaggcagcc
gtgggccaaaagaagcctcttgaagcacttggctcttccccacccctatcaagtaagaag
caaaaagtatctggggcatttgcggatcaaagcattgaacaacttaatgatgtcactgca
gtcagtggagttaacattcgggaagaagaagaacaactattttctagtgcgaaggaggat
agtcgagcttctgaagcatcacggcgggttgtacaagaagaagaagagaggctgctattg
cagaaagccccattgcagaagaagctagtggaaatcatggctaaatgtggtttgaagggc
atgagcaatgacgttgagaaatgtctctcattgtgtgtggaggaaagattacgaggagtt
attagtaatctaatcaggctgtcaaagcagcgagtggatgcggagaaaccaaggcatcga
acagttattacttcagatgttcgacaacaaattacattagttaaccaaaaggccagagaa
gaatgggagaagaaacaggctgaagaagaaaaacttcgaaagcttaatgatcctgatgat
ggttcaggtgtttctggtgacaaggagaaagatgaaggtcgaatgaaatcacttaaggta
aacaaagaggaggatgataaaatgaggacaacagcagcaaatgttgctgcccgtgctgct
gttggaggagatgacatgctgtcaaaatggcaacttatggctgagcaggcgcgacagaaa
cgtgaaggtggagtggattcagcttctagttctcaggcagggaaagatgctgtccgtaag
tcttcttcagcagcgggaagacatgggaaggacaacctagaaggtgaaagaaaaggaact
tcgaggaaatttggaaggaatcaaactaatgcaactcaaactaaggtggctcgtagcatt
tctgttaaagatgtcattgctgtgctgcaaagggaaccccagatgtccagatccaccaca
atatatcgtttgtttaacagagttcatcccgaatcaactggtgaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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