KEGG   Cucumis sativus (cucumber): 101207842
Entry
101207842         CDS       T02486                                 
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101207842
   03015 mRNA surveillance pathway
    101207842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101207842
   03041 Spliceosome [BR:csv03041]
    101207842
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101207842
Spliceosome [BR:csv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    101207842
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 101207842
NCBI-ProteinID: XP_004145330
UniProt: A0A0A0LVE0
Position
1:21669907..21676721
AA seq 905 aa
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPAELDQLVDTTKVKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKEVQIQLTGFMEKNTVKFMKELWILLLSAQKNASGVPQ
QFLDAKEEEIRKKKAETDFLANEIQKKREKENREIEEQRSKNMDDGAEKVSNSVLEHTSK
NVRSRAMRNYPEDEEVAEKRNGVRGRSSDRHKSRSMSRSPQRRRRSFSRGRSSSSPRRRD
RRDSFSPRHRSSHLMRRSGSTSHRKSRSPEVRQLRSPSQHSSPSPGRKSPYRSSSPMQRL
SLSPAHRRSPALDKHNRSPSPTRHRRSLSPIRRRRSPSPVRRRRSPSPKWRRRSPSPEWR
RRSPSPGRRRRSPSPGRRRRSPSPGRRRRSPSPGRHRRSPSPIRRWRSPSPIRRRRSPSP
IRRRRSPSPPRRHRSPSPYRRKSPSFVRRRRSPSPSHRRRSPSPAHYRRSPSPIKSHKSR
SPVRRPMLPSPSPTRKLDRSSPLDHRRTPSPLERRSPSTSLSKSPPLLQRSSPGLRKRSS
PSQHGRRSTYGRSYSSEEQENPSPVKVKSAQHRRRSLSQSPMDRSRNVQTSPASQLPSRS
LRSPERDAKERNNSNNRARASSSSLEKSPAPANSPPVTSSANDDRRLSSPQSRAKQHRRD
TRGEEEVATYTREGGNLESRSSLRKSLNSSIVGKVPSPGSDKHPQRDVPGSPNHKKSSSA
HKEPSLVEEQQLSYSREDMKHDEKSHSRRSKAKEDTELPSLENNNNRRDDSDSDLEEGYK
RKAGSKEKKRHRKSDRRDTSSDSEDSYDSELERKESRRRKKEERRLRKEKKRQKREERRR
KKEERRAGKTKAKNLSDNYSDDDDQAAKEESYHSDDADEAEQKRLEIELRKKALESFNAR
KGTRS
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgtctggcgggtttttccggggtacgtctgcggaccaagacactcgtttttcgaacaag
caagcaaagctgttgaagacacagaagttccctgctgaactggaccaattggtggatacg
acaaaggtgaagatggatgttatcaggccgtggattgctacgagggtgaccgagcttctt
gggtttgaagatgaagttcttatcaacttcatatatggtcttttggatggcaaggaagta
aatgggaaggaagttcaaatacaactcactgggttcatggaaaaaaatactgtgaagttt
atgaaagagctttggatactacttctcagtgcccagaagaatgccagtggtgtacctcaa
caatttttggatgccaaagaagaagaaattaggaagaagaaggcagagacagattttctt
gctaatgaaattcagaaaaagagagagaaggaaaatcgagaaatcgaggagcagagatcg
aagaatatggacgatggggctgaaaaggtgtccaattctgttttggagcatacgtcaaag
aatgtgcgctcaagggctatgcgaaattatccagaggacgaggaagtggctgaaaagaga
aatggtgttaggggaagaagcagtgatagacacaagtcaaggagtatgtctagatcacct
caacgaagacgacgctctttttcacgaggaaggtcgtctagtagtccacgtcgaagggac
cgtcgtgattcattctctcctcgacatagatcatcacatttgatgagaagatctggatct
acttcacatcgtaagtctcgatctccagaagtacgtcaattgcgttctccttctcaacat
agttcaccatctcctggtcgtaaatcaccatatcgatcatcttcgcctatgcaacgtcta
tcattatcacctgcacatcgaaggtcaccggcacttgataagcataatagatcaccatca
cccacgaggcatcgtaggtcactatcaccaattagacgtcgtcgttcaccttcacctgtt
cggcgtcgtagatcaccatcacctaaatggcgtcgtagatcaccatcacctgagtggcgt
cgtaggtcaccttcaccaggacgacgtcgtaggtcaccttcaccaggacgacgtcgtagg
tcaccatcaccaggacgacgtcgtaggtcaccatcaccaggacgacatcgtaggtcacca
tcacctatacgacgctggaggtcaccatctccaatacgacgtagaaggtcaccatctcca
atacgacgtcgaaggtcaccatccccaccacgacgtcataggtcaccatctccatatcgt
cgaaaatcaccttcctttgtgcgtcgtcgtaggtcaccatctccatcacatcgtcgtaga
tcaccgtctccggcgcattaccgcagatcaccatcacctattaaaagccataagtctcgt
tctcctgtgcgacgacctatgttaccttcgccctcacccacacgcaaattggataggtca
tccccccttgatcatcgcagaacaccctcacctctggaacgtagatctccatcaacctct
ttaagcaaatctcctccattgctgcaaaggtcatctccaggacttcgcaagagatcaagc
ccttctcaacatggtcgtagatccacatatggtcgaagttattcatcagaggagcaggaa
aacccatcccctgtcaaagtaaaatctgcccaacatcggaggaggtctctgtctcaatct
cccatggacagaagcagaaatgttcagacatctccagcatcccaactaccttctagatct
ttaagatcaccagaaagggatgctaaggaaaggaataattccaataacagagcacgagcg
tcatcatcgtctttggagaagtctccagcaccagcaaattctccaccagttacaagtagt
gctaatgatgataggaggttaagttctccacaatcacgggcaaagcagcatcgtcgtgac
acaaggggagaggaagaagtggccacctacactagggagggtgggaatcttgaatctagg
tcttcattgaggaaatcactgaattcttcaattgttggcaaagtcccttcacctggaagt
gataagcatcctcaaagggatgtgcctggaagtcccaatcataaaaaatcttcatcagca
cacaaagaaccttcacttgttgaggagcagcagctgtcatattcaagagaagatatgaaa
catgatgaaaaaagccactcacgccgaagtaaggccaaggaagacactgaacttccatca
ctcgaaaataataataaccgacgcgatgactcagattctgatttggaggaaggctataag
cgtaaagctggaagtaaggagaagaaaagacacagaaaatcagacaggcgtgacacttct
tcggactctgaagacagctatgattctgaattggagaggaaggagagcaggaggaggaag
aaggaggagaggaggttgcggaaggagaagaagcgccaaaaacgtgaagagcgtagacgc
aaaaaggaagagcgccgtgcagggaagacaaaagctaagaacctcagtgataactactcg
gatgatgatgatcaagctgcaaaggaagagtcttatcacagcgatgatgcagacgaggcc
gagcagaaaaggctagagatcgaattgaggaagaaggcactggaatcattcaatgcaagg
aaaggaacaaggtcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (500)   
   KEGG ORTHOLOGY (1)   
   RefGene (496)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (514)   

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