KEGG   Cucumis sativus (cucumber): 101209351
Entry
101209351         CDS       T02486                                 
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101209351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    101209351
   03400 DNA repair and recombination proteins [BR:csv03400]
    101209351
Enzymes [BR:csv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     101209351
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Topoisomerases
   101209351
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     101209351
   FA (Fanconi anemia) pathway
     101209351
SSDB
Motif
Pfam: Topoisom_bac Toprim zf-GRF zf-C4_Topoisom zf-CCHC
Other DBs
NCBI-GeneID: 101209351
NCBI-ProteinID: XP_011652135
UniProt: A0A0A0LBG7
Position
3:32354393..32372713
AA seq 924 aa
MSGGRSITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNMIV
TSVTGHLMELAFEERYRKWHSCDPVQLFHAPVHKFVPEDKLDIKRTLEQESRRAQWLVLW
LDCDREGENIAFEVVEVCTAVNHHLNIKRAHFSALIERDIHDAVQNLVQPNKWFADAVDA
RQEIDLRIGASFTRFQTLLLKDAFNIDSVTDDRNIVLSYGPCQFPTLGFVVERYWEIQSH
EPEEFWTINCSHNSDDGISTFSWTRGNLFDYTCAVVFYEMCVQESTATVVNVRRQETLKY
PPHPLNTIELEKRASRYFRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQRTDLHGIVRE
QQEHQIWGAYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHRLYEL
VVRHFLACVSQPAVGAVTTVEIDIAGELFSTSGRMILARNYLDVYRFESWGGSTIPTYVS
GQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDAN
TRFTPTNLGKALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMKTC
FLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYMV
GCLAFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLGCV
GGCDDILRQLTEICGTGSRVSARGRGTSSSNVQRDNPGQSVCIFCQQVGHSSNDCPSQSV
GSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGN
GGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQIAATFVSATGEP
ISDRRCFVCGDPSHFANVCPNRGA
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgtccggcggccgttcgattaccgtcctcaatgtggcagagaagccatcggtggcaaaa
tctgtcgctaccatactctccaggaaccagggtctacgagttcgcgatggtcgctctcgc
tacaacaagattttcgagttcaactacgccattcgaggccagtcttgtaatatgatcgtc
acttctgtcactggccacctcatggagcttgctttcgaagaacggtaccgcaaatggcat
tcctgcgacccagtccagctcttccacgctcccgtccacaaatttgtccccgaggacaag
ttggatataaagaggactttggaacaagaatctagaagggctcaatggcttgtcctttgg
cttgattgtgatagagaaggagagaatattgcattcgaagtggtggaagtttgcacagca
gtaaatcatcatcttaacattaagagagctcacttctctgctttgattgaaagggatatt
cacgatgctgttcaaaatcttgtccaaccaaataaatggtttgctgatgcagttgatgct
agacaagaaattgatctaagaattggagcttctttcactaggttccaaactctgctgttg
aaagatgcatttaatattgattctgtcacagatgacagaaatattgttttgagttatggg
ccatgtcagtttcctactcttggctttgttgttgagcggtactgggagattcaatcccat
gagccagaagaattttggacaatcaactgttcacacaattctgatgatgggatttctacg
tttagttggacaagagggaatctatttgattatacctgtgctgttgtattctatgaaatg
tgtgtacaagaatccactgctacagttgtaaatgttagacgacaagagacattaaagtac
cctcctcatccattgaatacaattgagcttgaaaaacgagcttcacggtacttccgaatg
agttctgaacacaccatgaaggtggccgaagatctataccaagcaggtttcattagttat
cctcgtacagagactgattgcttttctcaaaggactgatcttcatggtattgtgcgagaa
caacaagaacaccaaatatggggagcatatgcacagaggttgctagatccggaatcaaga
ctttggaggaatcctagtggtggggggcatgatgacaaagctcatccacctattcaccca
acaaagttctcggctggggaacgtggatggagccaggatcaccatagattatatgagcta
gtcgttcgtcatttccttgcatgtgtatcacagccagctgtaggtgctgtaactacggtt
gaaattgatattgctggtgaattgttttctacgtctgggaggatgatactagcaagaaat
tacctggatgtttaccgctttgaatcatggggaggttcaactattccaacctacgtttct
gggcaacagtttgttccaacaacattaacccttgattcgggtgtcactagaccacctccc
cttctgagtgaagctgatttgctttcttgtatggataaggagggaattggtacagatgca
acaatgcatgaccacatcaagaagctgttggatagattttatgcaacgaaggatgcaaac
actcggttcacaccaactaaccttggtaaggctctggttatgggatatgacgacatgggg
tataatctgtggaagccaaaccttagagcaatcatggagcatgagatgaaagcagttagt
gagggcactaagcgaaaagatgaagtgttggcttcatgcttgcagcagatgaaaacttgc
ttcttagatgcaagggtcaataagcaaaaacttcttgaagcaatggaggttttctttgag
agatctaatggttctggcggggatgaaaatcgtgcagttggagaagttgttcagctgtgt
gggctgtgtcaggactcagatatggtgcttaaaagaaacagggatggaaattacatggtt
ggatgtttggcctttccccagtgtagaaatgttgtctggctcccaggatccattgcagaa
gctacagtaacctctgatcgttgcaccttgtgcactccaggccctgtttacttgatccaa
ttcaagtttcgccagctggaaataccaccaaactacaatgctaaccacttgggttgtgta
ggtggttgtgatgatattcttaggcaattgactgaaatctgtggtaccggatcccgcgta
tcagctagaggtcgagggacttcatcatccaatgtgcagcgggataaccccgggcaaagt
gtatgcattttctgccaacaagtagggcattcctcaaatgattgcccttcccaatctgta
ggttccagaagtgctcagcgtcggcaaagtggagaatcttcagtttcgtgtagtagctgt
ggctcaccatgcgtcttacggactgctaatactgccaataataggggaagaaagttctac
aaatgtcaatctcaggagtgcaatttcttcgtatgggaagacaacgtagacaatggcaat
ggaggaaatagtgttcaacggtctaatgtcaggagctcaggctctgcaccatctaatctt
aaccctggtcaaaacacaggtcgtggccgtggccgtggccgtggtcgtggtcgtgatcgg
gatcgggatcggggtcaaggtcagattgcagcaacatttgtgtcagcaactggtgagcca
atatctgatagaagatgttttgtttgtggtgatccgtcacacttcgcaaatgtttgccct
aaccgtggtgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system