KEGG   Cucumis sativus (cucumber): 101211341
Entry
101211341         CDS       T02486                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101211341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101211341
   03036 Chromosome and associated proteins [BR:csv03036]
    101211341
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101211341
   Coactivators
    SAGA/TFTC/STAGA complex
     101211341
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101211341
    STAGA complex
     101211341
    TFTC complex
     101211341
    SAGA complex
     101211341
    SLIK complex
     101211341
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone
Other DBs
NCBI-GeneID: 101211341
NCBI-ProteinID: XP_011659626
Position
7:complement(21796243..21801964)
AA seq 668 aa
MADSTSSPRPVQPNPMDPSPPPPQQQPQVQPSTTAIPQNSSNPSNSSVNPPIPSPSALVQ
SPSIDHLHPLAQISSPPLSHISLPQNQQQQPQQQLSPAVGLDYQQKPIQQQQQQQQQQQQ
QQQQLVQQPQNASAMTNFQIQQALQRSPSISRLNQMQPQQQQQQQQQFGMMRQQSGLYSQ
MNFGGASTNQQQQQQQQQPNQQQQMGTGNLSRSTLIGQGNHLPMLSGAAQYNLPSQLLAS
SKQKAGLVQGPQFQSSNSHGQALQGIQAMGMMGSMNLPSQLRANGLASPYAQQRINQGQI
RQQLSQQSSLTSPQVQNLPRMSNLAFMNQQLTNLAQNGQPTMMQNSLQQQQWLKQMPSMS
NPGSPSFRLQRQQVLLHQQLASSNQLHQNSMSLNPQQFPQIVQQQSSMGHQQLHQQHQQQ
QQQPQSQQQQPQQQLQQQPLHQQQQLLQQASPQQSLQPVLHQHQQHSPRIAGLAGQKSLS
LTGSHPDATASGASTPGGSSSQGTEAATQVLGKRKIQDLVSQVDPHGKLEPEVEDLLLEI
ADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKNWQLNVPGYSSDEWKNHNKNLSSSD
VHKKRLDMIRILKEASCVETNVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQTAGSQ
LLQQMMRF
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcagacagtacttcgtcgcctagaccggttcaaccgaacccgatggacccttcacca
ccaccgccgcaacaacaaccgcaagttcaaccttcaacaaccgctattcctcaaaattca
tcaaatccgtcaaattcctctgtgaatcctcccattccatctccttctgcacttgttcaa
tcgccttcgattgaccatttacatccgctagctcaaatctcttctcctcctctttcgcac
atctctcttccgcaaaatcaacagcaacagccacagcaacagttgagtcctgcggttgga
ttggattaccagcagaagcctatacagcagcagcagcagcagcaacaacaacaacagcaa
caacagcagcaattggtgcaacaacctcagaatgcgagtgcgatgacgaatttccaaatc
cagcaagctttacagcgttctccttctatttctcggttgaaccaaatgcaaccacagcag
caacagcagcagcaacagcagtttgggatgatgagacaacaatcggggctttatagtcag
atgaattttggtggggcttctacaaaccagcagcaacaacaacagcagcaacagcctaac
caacaacagcaaatgggaactgggaatctgtcgcggtctacattaatcggtcagggtaac
catttgcccatgttgtctggagcggctcagtataatttgccgtcacaattactggcttcg
tcaaagcagaaggctggattagttcagggtccacaatttcagtcaagtaactctcatggg
caagctttgcaaggaattcaagcaatggggatgatggggtcaatgaatttgccctcacaa
ctaagagctaatggccttgcctcgccgtatgcccaacagagaataaaccaaggtcaaata
aggcagcaattatctcaacaaagttcactcacctctccacaggttcagaacttaccgaga
atgtcaaatcttgcatttatgaatcaacaattgaccaatttggctcagaatgggcagcca
accatgatgcagaactctttgcaacagcaacagtggctaaagcaaatgccatcgatgtct
aatcctggctcaccttcatttcgtctgcagaggcaacaagtcttgttacaccagcaactg
gcttcgtctaatcaattgcatcaaaactccatgtcgttgaaccctcaacaatttcctcag
attgtacagcaacagtcatccatgggacatcaacagttgcatcaacaacatcaacagcaa
cagcagcaaccacagtcacaacaacaacaaccacaacaacagctacaacagcagccactt
catcaacaacagcagctacttcaacaagcatcaccacagcaatctctgcaaccagtattg
catcagcatcagcagcattctcctagaatagctggacttgcgggccagaaatctctcagt
ttgactggatcacatccagatgccacagcatctggcgctagtacaccggggggaagttca
agccaagggacagaggctgcaactcaagtccttgggaagagaaagatacaagatctggtt
tcacaggtagatccacatggaaagctggaacctgaagttgaagaccttctcttggagatt
gccgatgattttatcgattcggttactaccttttcatgcaatttggcaaaacatcgaaaa
tcctcaactttagaatccaaagatttattgctacacttagagaagaattggcagttgaac
gttcctggatattcaagtgatgagtggaagaatcacaacaaaaatttatcatcaagtgat
gtccacaagaaacgattggacatgatacgcatattgaaggaagcatcctgtgtggaaaca
aatgtaaacagccctaaagagatggtacgacaaggggttggaatgtccattggtcccaac
actctaacaaggccttcaccgagttcagaacaactattatcacaaacggctggttcacag
ttgctgcagcaaatgatgaggttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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