KEGG   Cucumis sativus (cucumber): 101211398
Entry
101211398         CDS       T02486                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv04120  Ubiquitin mediated proteolysis
csv04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101211398
   04120 Ubiquitin mediated proteolysis
    101211398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csv04121]
    101211398
Enzymes [BR:csv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101211398
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  U-box type E3
   101211398
SSDB
Motif
Pfam: Ufd2P_core U-box DUF1390
Other DBs
NCBI-GeneID: 101211398
NCBI-ProteinID: XP_004136686
UniProt: A0A0A0LCQ5
Position
3:33580489..33589618
AA seq 1043 aa
MATSKPQRSPEEVEDIILRKVFLISLTDTSDSDSRIVYLEQTAAELLSEGKPLRISRDVM
ERIIIDRLSAHVPSAEPPFQYLIGCYRRAHDETKKIASMKDKTLRSDMEIALKQAKKLTI
SYCRIHLGNPELFSSGADLGTNSNTSPLLPLIFSEVGGSSMDGFGASTSVGGAYQCPPGF
LEEFLRDSDFDTLEPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNH
PWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLS
SFTTIKTVMNNLYDGLSEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASS
GMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINN
GTQLRTDNPGQSSDSESRLLQSQEASSSGSNATIGSSTAKARSSSDKTRYPFICECFFMT
ARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQ
EKLCYEAQILRDGTLIQQALTFYRLMVIWLVGLVGGFKMPLPSACPMEFASMPEHFVEDA
MELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSS
VTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQE
RQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQL
VGPQRKSLSLKDPEKYEFRPRELLKQIVQIYVHLARGDTENIFPAAISKDGRSYNEQLFT
AAADVLIRRIREDSRIIQEFTDLGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDP
VILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIKEFIRSQELKKQL
DGGVAMQSSKATIQPTSGEMLID
NT seq 3132 nt   +upstreamnt  +downstreamnt
atggcgacctcaaaaccccaaaggtcacctgaggaggtcgaagatatcatccttcgtaaa
gtcttcttaatttctctcacagatacctccgattctgattccagaatcgtctatctcgag
caaaccgccgccgaacttcttagcgaaggcaaaccattgaggatttcaagagatgtaatg
gagcgcatcataatcgatcgtctttctgcccatgtcccctccgccgaacccccttttcag
tacctaattgggtgctaccgtcgagctcacgacgagactaagaaaatcgcttccatgaag
gataagactttgcgctctgatatggaaattgctcttaagcaggccaagaagttgacgatt
tcgtattgtaggattcatttaggcaatcctgaattgttttcttccggtgccgatttaggt
actaactccaacacttcgcctttgcttcctttgattttctctgaggtcggtgggagctcc
atggatggatttggggctagtactagtgttggtggagcctatcagtgccctccgggtttc
ctggaggagtttctccgtgactcggattttgatacgttagaacccattttgaaggggttg
tatgaggatttaaggggtagtgtccttaaagtttctgctcttgggaacttccagcagccc
ttaagagcacttaggtttctggtcagctttcctgtcggtgctaaatctcttgtgaatcac
ccttggtggattcctactggtaaatattccaatgggcgtgtcattgagatgacaagcatt
ttggggcctttcttccatgtcagtgctctgcctgaccatgccatttttaagagccaacct
gatgttggccagcagtgcttttcagaagcatcaactcgtagaccagctgatttactatct
tcattcactacaattaaaacagtcatgaataacttatatgatggcctttcggaagttctt
ctctcccttcttaagaacacagagacccgtgaaaatgttcttgagtatctggcagaggtg
ataaatagaaactcatcaagggctcatatacaggttgatcctctctcctgtgcaagttcg
ggcatgtttgttaatctcagtgccatcatgctacgtctttgtgagccttttctagatgca
aacttgaccaaaagggataaaattgatccaaaatatgtatgttatagtaaccgattggag
ttgagaggattaactgctctacatgcttcatctgaagaagttaccgagtggattaataat
ggtactcagttgagaactgataaccctgggcagtccagcgacagtgaaagtcgcttgcta
caatcccaggaggcttccagttctggcagtaatgctactattggatcttctactgcaaaa
gcaagatcaagtagtgataaaactaggtacccgtttatatgtgagtgcttctttatgact
gcaagggtgctgaatttgggcttgttaaaagcattttcagacttcaagcatttagtacag
gatatatctaggtgtgaagatacattgtccacgcttaaagccatgcagggacaaggccct
gccccacagcttgaaatggatatagctcgccttgagaaggaaatagagttgtactcacag
gaaaaactttgttatgaagctcaaatactgagggatgggacactgatccagcaagctctt
actttctatcgattaatggtcatctggttagttggtttggttggtggatttaaaatgcct
cttccatcagcttgtccaatggaatttgcatccatgccagaacattttgtggaagatgct
atggaattgcttatatttgcttctcggattccaaaagctttggatggcatcaatttggat
gattttatgaacttcattattatgttcatggcaagtcccgaatatattagaaatccttac
ttaagagcaaagatggttgaagttctgaactgctggattcctcgtagaagtggttcatct
gtaacggcaacactatttgaaggccaccaactatcgcttgagtatcttgttaggaatctt
ttaaaactctatgtagacatcgagtttactggatcacatacacagttttatgacaagttt
aacatccgtcataatattgccgaacttctggaatacctttggcaggttcctagtcatcgc
aatgcttggagaatgattgccaaggaagaggagaagggtgtttacctgaatttcttgaac
ttcctaatcaacgatagcatatatcttcttgacgaaagccttaataagattcttgaactt
aaagagcttgaagctgaaatgtcaaatactgcagaatgggaacggcgacctgctcaagag
aggcaggaaagaactcggctctttcactcccaagaaaatatcatccgaatcgatatgaaa
ttagcaaatgaggacgtgagtatgctggcatttacttcagagcaaatcacagctcctttc
ctacttccagagatggttgaaagggtggccagcatgcttaattattttctcttgcaactt
gttggtcctcagcgaaaatctcttagtctgaaagaccctgaaaagtatgaattccgtcca
agagaattgcttaagcagattgttcaaatatatgttcatctggcaagaggggatacggag
aatattttcccagctgccatttcgaaggacggccgatcgtacaacgagcagttgttcact
gctgcagcagatgtacttattagacgtattagagaagatagtaggataatacaggagttt
actgatcttggtaacaaagccaaagatgcagcttctgaggcaatggatgctgaagctact
ctaggagatatacccgacgaattcctcgacccaatccaatacactttaatgaaggaccct
gtgatcttaccttcttcgaggatcaccgtcgacagacccgtcattcaaagacatctcctc
agcgacagtaccgacccattcaaccggtctcatctgaccgcggacatgctaataccaaat
gaagaactgaaagcaagaatcaaagaatttattaggtcacaagaactgaagaagcaacta
gatggaggggttgcaatgcagagcagcaaggcaaccattcaacccacaagtggagaaatg
ttgattgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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