KEGG   Cucumis sativus (cucumber): 101211922
Entry
101211922         CDS       T02486                                 
Name
(RefSeq) probable polygalacturonase At3g15720
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv00040  Pentose and glucuronate interconversions
csv01100  Metabolic pathways
Module
csv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:csv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101211922
Enzymes [BR:csv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     101211922
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3
Other DBs
NCBI-GeneID: 101211922
NCBI-ProteinID: XP_031739967
Position
4:2814600..2816656
AA seq 397 aa
MKLLSAAIFLYSIAILSSWTVLGSSDFNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEES
PTLHVPDGKTYLLNPLKFQGPCKSKQVIFYLGGTLMAPTKDEWISDGKGQWIQFFDIEGL
NLQGGGRFDGQGSLWWKDCDHKHCKRPTALFFHNCNGLQMKGMKHINSAKNHISINMCHD
VIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDCIAINNGSSNININGITCGP
GHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWEGGYGYAKNITFEKITMKNA
KNPIIIDQYYSSYAYSRKMKGMDIKVSDVTYREVNGTSANEDAITFNCSQARCSNIILDN
VNIKMTNPGEKAKAVCQNADGKVLSAVPPVSCLSKSH
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaagctcctttcagctgcaattttcctatattccattgctattctaagctcatggact
gtattgggttcatctgatttcaatgttcttgattacggtgcaattggaaatggcaaaacc
gatgattcaaaagcatttctgaaagcttggaatgatgtgtgtggagcaacagaagagagt
ccaacattacatgtacccgatggaaaaacttacctcttgaaccctctcaaatttcagggt
ccttgcaagtccaaacaagtcattttttatcttggaggaactctaatggctccaaccaag
gatgaatggatcagcgatggtaaaggccaatggatccaattttttgacatagaaggtttg
aatctacaaggaggtggaagatttgatggtcaagggtctttatggtggaaagattgtgat
cataaacactgtaaacgacccacggctttgttcttccacaattgcaatgggcttcaaatg
aaaggaatgaagcatatcaacagtgccaagaatcatatatctataaacatgtgtcatgat
gttattttctcgcaccttcatattagtgctcccgaggatagtcctaacacggatggaatt
gatatttctgaatcaacaaatatttttatcgaagattctttcatggcaacaggtgacgat
tgtattgctattaataacggatcttctaatatcaatataaacggtatcacttgtggccct
ggtcatggcataagcattgggagcttaggaaaagatggtgagtataacgtggttgaaaat
gtgcatgtaagcaattgcctcctacgcagcactcaaaatggaattagaatcaagacttgg
gagggtggatacggatatgcaaagaacattacatttgagaaaataacaatgaagaatgca
aaaaatccaatcattattgatcagtattattcatcttacgcatactcaagaaaaatgaag
ggaatggatataaaagtaagtgatgtgacttaccgtgaagttaatggaacatcagcaaat
gaagatgcaattacttttaactgttcgcaagctcgttgctcaaatattatattggacaat
gtgaacataaaaatgacgaatccaggagagaaagccaaagctgtttgtcaaaacgctgat
ggaaaagttttgtcagctgttccacccgtctcttgtctatcaaaatctcattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system