KEGG   Cucumis sativus (cucumber): 101212812
Entry
101212812         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101212812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101212812
Enzymes [BR:csv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101212812
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     101212812
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002
Other DBs
NCBI-GeneID: 101212812
NCBI-ProteinID: XP_031740252
Position
4:complement(25688453..25697165)
AA seq 1197 aa
MGTSGAKDDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNIHDLGEAFLKDFCKKSSMAFF
NQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQPGYDPSKKGDGEWRYATVKFGKVTLD
KPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVD
KEPVEGASDNRDVFIGRLPVMVNSDLCWMKDGQKRDCEFDRGGYFLIKGAEKIFIAQEQI
CLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWIL
FFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEIR
KTSFPPADKIEDCLNLYLFASLKGSKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRF
ELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGA
WAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFL
STPDGENCGLIKNLSGTGLVSLNTKKSITPTLFRCGMENLVDNTSTSFCGKYRIFLDGEW
VGVCEDSLSFVTNVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRI
DKSKGENYTFQSLLDKGIIELIGTEEEEDCRVAWSIKHLMEDEGTTKYSHCELDMSFLLG
LSCGLVPFANHDHARRALFQSQKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTA
DCLGTPGYLSSHAGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHI
RSYKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRC
AESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVL
GFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTP
SVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGP
VHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA
SVIQRSVAGGRKMRGPYCRVCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3594 nt   +upstreamnt  +downstreamnt
atggggacatcaggtgcaaaggacgatatagagatgaatagcgagggggaagacttatca
cctggaatggatttggatacagatgatgatgatgattattattctgagccagtcaacata
catgatttgggggaagcatttctgaaggacttctgtaagaagtcatcaatggcattcttt
aatcagtacggccttatcagtcaccaaatcaactcgtacaatgacttcataaaaaatggt
attcagaaggcctttgatttttttggtgacattttagttcagccaggatatgacccctct
aagaaaggagatggggagtggagatatgctacagtgaagtttggtaaggtaaccctcgat
aagccaaagttctggggtggtgcagcaagtggaaaagagtataacatgcttcctaggcat
gctcgacttcagaacatgacttattcatcaaggatgaaaataaatatcagtttagagata
tatactcaaaagttagtcagcagtgacaaatttaaaactggaaaagatcaatatgtcgac
aaggaacctgtagaaggtgccagcgacaacagggatgtctttatcggcaggctacctgtg
atggtgaattctgacctctgctggatgaaggatgggcagaagcgtgactgtgaatttgat
cgtggaggttattttttaatcaaaggtgcagaaaaaatatttattgctcaagagcaaatt
tgtttgagaaggctctggatttctaatgttcaaggctggactgtggcatacagatcagaa
gttaagagaaatagactaattattagactagttgaaaattccaagtctgaagatctaaaa
agcaaggagaaagtcctcaatgtatattttttgtccacagaagttcctgtatggatttta
ttctttgcacttggtgtttcatcggacaaagaaatagtagatttaattgactatggcaga
gatgatccaactgttctgaatattctttttgcctctgttcgtgaagttgataatgatgat
aagtggaaagactttcgaagaggtaaaagagcgttgacttttttggacaatgaaattaga
aagaccagtttcccacctgctgataaaattgaagattgtctgaacctgtatctttttgcc
agcttgaaaggctcaaagcaaaagtgtcatttccttggttatatggttaaatgtcttctg
caagcctatactggccgtaggaaatgtgataatagggatgattttcgcaataagaggttt
gagctggctgcagaactgcttgaaagagagcttaaagtacatattgcacatgcacgtaga
cgcatggaaaaagctttacaaagggacctctatggggatcgtcaagtgcatccaatagaa
cactatttggatgcttccataatcactaatggtctatctcgagcattctctactggagca
tgggcgcatgcatttaagaggatggaaaggatttcaggtgtggtggctactcttggtcgt
gctaatcccttgcagacaatggcggaattgaggagaacacgtcaacaggttgcatacact
gggaaagttggtgatgcaagatacccgcatccttctcactggggaagggtttgctttctc
tccactccagatggtgaaaattgtgggctcattaaaaatttgtccggcacaggacttgta
agcttaaacacgaagaagtcgataactcccacattgtttcgctgtggaatggagaatttg
gtggacaatacatctacttctttttgtgggaagtacagaatttttctcgatggggaatgg
gtcggagtttgtgaagattccctttcatttgtcacaaacgtgagacgcaagcgacgaagg
aatccgtttctgcatcaggtagaagtcaaaagagatgaacaactgaaagaagtacgtata
ttttccgatgctggaaggatattacgtcctctcctagttgtagagaacttaaataggatt
gacaagtctaagggagaaaactacacttttcaatcccttttggacaagggaataatcgaa
cttattggaactgaagaagaagaagactgtcgtgtagcttggagtattaagcatcttatg
gaagacgaagggaccacaaaatattcccattgtgaacttgatatgtcatttttattaggt
ttgagctgtggacttgtcccttttgcaaatcatgatcatgccagaagggctctttttcaa
tcccagaagcactctaatcaagctattggattttcaccaaccaattctaattttcgtgtg
gatactttatcccaccaattacactatccacaaaggccactttttcgtacaatgactgct
gattgccttggaacacctggatacctctcatctcacgccggtatactccctaaacccgag
ttctataatggtcagaatgctattgtggcagtcaatgttcacctgggttacaaccaagaa
gattcattagtaatgaacagagcctctcttgagcgcggcatgtttcggtctgagcatatc
cggagttacaaggctgaggtagataataaagaatcttcagagaagaggagaaaatccgat
gatgcaataaattttggaaagactcaaagtaaaattggaagagttgacagcttagacgat
gacggcttcccatatataggtgcaaatttgcagagtggagacattgtcattggtagatgt
gcagaatctggagccgatcacagtattaaactgaagcacactgagaagggcatggttcag
aaagttgtgctctcttctaacgacgacgggaagaactatgctgttgtatccctcagacag
gttcgatctccttgtcttggagacaagttctcaagtatgcatggacaaaagggagttctg
gggtttttggagtctcaagagaatttccccttcaccatccaggggatagtcccagatatt
gttataaatccacatgcttttccttcgcgacagactcctggtcaactattggaagcggct
ctcgggaaagggatcgctgctgggggttctctgaaatatgcaacacctttctcaactcct
tctgttgatgccattactgaccagcttcacagggcagggttttcaagatggggaagcgag
agagtgtacaatggccgaactggtgaaatgatgcgatctcttatattcatgggtccaacc
ttctaccagcgcttaatccacatggctgaagataaggttaaatttcgcaacaccggccct
gtccaccctctcacccgacaacctgttgctgaccgaaaacgttttggagggattaagttc
ggggagatggaacgtgattgtcttatagcccatggtgcctctgccaacttgcacgaacgg
ctgttcactctcagtgactcttcccagatgcacgtttgccagaaatgcaagaatgttgct
agtgtgattcagcgatcagtggctggtggtcgtaagatgaggggtccatattgtcgggtt
tgtgaatcattcgatgatatcgtgagggtaaatgtaccctatggagccaagttgttgtgc
caggagctcttcagcatgggaattaatctcaagtttgaaacacaactttgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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