KEGG   Cucumis sativus (cucumber): 101213221
Entry
101213221         CDS       T02486                                 
Name
(RefSeq) elongation factor 1-alpha isoform X1
  KO
K03231  elongation factor 1-alpha
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101213221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101213221
   03016 Transfer RNA biogenesis [BR:csv03016]
    101213221
   03012 Translation factors [BR:csv03012]
    101213221
   04131 Membrane trafficking [BR:csv04131]
    101213221
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csv04147]
    101213221
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     101213221
Transfer RNA biogenesis [BR:csv03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    101213221
Translation factors [BR:csv03012]
 Eukaryotic type
  Elongation factors
   101213221
Membrane trafficking [BR:csv04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    101213221
Exosome [BR:csv04147]
 Exosomal proteins
  Proteins found in most exosomes
   101213221
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 FlpD SRPRB Semialdhyde_dhC
Other DBs
NCBI-GeneID: 101213221
NCBI-ProteinID: XP_004149547
Position
6:14653027..14655724
AA seq 449 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHESLPEAVPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSQYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggggaaagagaagactcacattaacattgtggtcattggccatgtcgactctgggaaa
tctaccaccaccgggcatttaatctataagcttggtggtattgacaagcgtgtcattgaa
aggtttgagaaggaagctgctgagatgaacaagaggtccttcaagtatgcttgggtgttg
gacaagcttaaggctgaacgtgaacgtggtattaccattgatattgctttgtggaagttt
gaaaccaccaaatactactgcaccgttattgatgctcctggacatcgtgacttcattaag
aacatgattactggtacctcacaagctgattgtgctgttctcattattgattccactact
ggtggttttgaagctggtatttctaaggatggtcaaacacgtgagcatgctttgctcgcg
tttactctcggtgtcaagcagatgatttgctgctgcaacaagatggatgccaccaccccc
aagtactccaaggcaaggtatgatgaaattgtcaaggaagtttcttcctacctcaaaaag
gtcggatacaaccctgacaaaatcccctttgttcccatctctggttttgaaggagacaac
atgattgagaggtcgaccaaccttgactggtacaagggtccaactctccttgaggctctt
gacttgatccaggagcccaagaggccctcagacaagccactccgtcttccacttcaggat
gtgtacaagatcggtggtattggaactgtaccagttggtcgtgttgagactggtgtcctc
aaacctggaatggtggtcacttttggcccttctggattgaccactgaagtcaagtctgtt
gagatgcaccacgaatctctacccgaggccgttcctggtgacaatgtgggattcaatgtg
aagaatgttgctgtaaaggatctcaagcgtggtttcgtcgcttccaactcaaaggatgac
cctgccagggaggctgccaacttcacttctcaagtcattatcatgaaccaccctggacaa
attggcaatggttatgctccagtgcttgattgccacacctctcatattgcggtgaaattt
gccgagattctaaccaaaatcgacaggcgatcaggtaaggaacttgagaaggaacccaag
ttcttaaagaatggtgatgcaggtatgattaagatgattcccaccaaacctatggtggtg
gaaaccttctctcagtaccctcctcttggacgtttcgccgtaagagacatgagacagaca
gttgctgttggtgtcatcaagtccgtcgaaaagaaggatccaagtggtgctaaggttact
aaatccgcagccaagaagggtggaaagtga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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