KEGG   Cucumis sativus (cucumber): 101216348
Entry
101216348         CDS       T02486                                 
Name
(RefSeq) nuclear pore complex protein NUP88
  KO
K14318  nuclear pore complex protein Nup88
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101216348
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101216348
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101216348
SSDB
Motif
Pfam: Nup88
Other DBs
NCBI-GeneID: 101216348
NCBI-ProteinID: XP_004149250
UniProt: A0A0A0KLW8
Position
5:complement(5813212..5819787)
AA seq 819 aa
MRYNFDLNQADSDPPRSLTPKRDVDWLPLKTHPIFTPTSTSSSSSSGHDYGVSVSPPLRN
LLASDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVQKISIN
QNGSALALVGSGGLCIMYLYGHSSTSDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHPY
SNFHLGVLSSDSVFRLFNLSTDLVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLWD
KFSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSFGLKSPNPTAVNSSLAISWL
EETFPNLVQATDGGDAYMIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEGRA
VSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGNPPRVRVDPNDNILGLAMICE
VVTRKLTKVKLDQPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQRIY
ALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSDSL
GYSWILGITLSHECIVLEMKTWNLLVPVQVSNFLYEGKSAAAATGERNESERPEIISKDL
LGGPKVVLLPQSSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPKLK
RLIEDQQTRLKDAQQKLIKVEGKQQLLDDRIERAIELHNVLEERIRRLKNLPGAHKKPLS
KAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNIVNQQQKMYRRNTYIQG
SQISQLKSSLEKLSLLNAENTIKVKLVESTIQSKERNRS
NT seq 2460 nt   +upstreamnt  +downstreamnt
atgagatacaatttcgacctgaaccaagctgattctgatccccctcgttccctaacccct
aaacgggatgtcgattggcttcctctcaagacccaccccattttcactcccacctccacc
tcctcctcctcctcctccggccacgactatggcgtttctgtttctccccctctccgaaac
cttctagcgtccgacggcgcctctcgtctctatttctgggactccaccaaactctgcttg
caccgtatttccatccgcctcggagaacccgaacccacctccgtcctcgccgcttctcct
tctaaagtattgcaaccggatgtgcaacttgactttgtggtgcagaagatttctatcaat
cagaatggatcggcattggcccttgtgggttcaggcgggttgtgtataatgtacctttat
ggtcatagttctaccagcgataacaacactgtcatctgtaggactgttagagttggtccg
caaatctactgtggtggccatgatgtcatacgcacgcttcaagtttcttggcacccgtat
agcaacttccatcttggagtgctttcatctgattctgttttcaggcttttcaatttgtct
acagatcttgtgcaaccagagcaagaatattatctacagccagtagaacctggtcaatct
aaaaatgccacgtcaatctgccctgttgatttttcatttggggaagaccacttgtgggac
aagttcagtgtgtttgttttattcagtgatggttcaatttacatcctctgcccagttgtt
ccatttagaagtgtttacaagtgtgaatctatattggagatttataacgatgctcagtcc
tttgggctcaaatcacccaatccaacagctgtgaattccagtcttgcaatttcttggttg
gaagaaacttttccaaatttagttcaagcaacagatggaggagatgcatatatgatagta
gcccagccttgtgctttatttgatgcctcacttgcattgcaggggcctttgaggagggca
tgtaataatggagatgaaggagatatatcaattaaaggtgctgaatgtgaaggccgtgca
gtaagtttattgtataatctaatcagcaaagactcagttcttgtgacagcttggagtggt
gggcaactgcagattgatgcccttgcagatgaaattcaacctgtctggaatcttggtaat
cctccacgagtccgtgttgatccaaatgacaatattcttggtcttgctatgatatgtgaa
gtggttacaaggaagctcaccaaggtgaagcttgatcagccacttgatcatacagtttgg
tcggggctcccaccccctttgctgaggctggctatcgtagatctagcccttccaaagaaa
atggaaaaagattctcttataacaatgtttgccgataaacttatggatcaaagaatttat
gctcttcataatggaggtatagactcgattatattgcactttctccccttcacaagtcaa
agcagaggacagaaccaaactatgagaactccctctgtgcatcctgttctgaatacctgc
cagggagacacttccagcccttttccgctttgtggttttgcctcattatctgattcttta
ggatattcttggattctgggaattaccctttctcacgaatgcattgttctagagatgaaa
acttggaaccttctagtcccagttcaggttagcaattttctatacgagggaaaatctgct
gcagcagcaacaggagagagaaatgaaagcgaaagacctgaaattataagcaaagatctt
cttggcggacctaaggtggttctccttcctcagtcatcatcaactatgcgttctgtgact
gctgattccattgaaggtcggtccatgcttcatcagtatttcaagctcttccatgaaaat
tatgtggagtatgcgcatgcggtgtactacgagctcaagcagcatgagcccaagttgaag
aggttaatcgaggaccagcaaactcgtttaaaagatgcacaacaaaaactcataaaagta
gaggggaaacagcaattattggacgacaggatagaacgtgcaatcgaactgcacaatgtc
ctggaagagcggatacgtaggttgaagaacttgccaggagctcacaaaaagccgttgtcc
aaagcagaaagagagttcaaatctacactcgaccactttacagatgttgagttggacgca
ttgcatacttcgattgatacactaactgcaagactaaggagattcacaaattcttcaaag
aacaacaatatagtgaaccaacaacaaaaaatgtacaggagaaacacttatatccaaggc
tctcagatctcccaactcaaatcatcacttgagaaactctccctcctcaatgctgagaac
actataaaggttaagctagttgaatctacaatacaaagcaaggagaggaacagatcctga

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