KEGG   Cucumis sativus (cucumber): 101216563
Entry
101216563         CDS       T02486                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101216563
   03015 mRNA surveillance pathway
    101216563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101216563
   03041 Spliceosome [BR:csv03041]
    101216563
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101216563
Spliceosome [BR:csv03041]
 Complex C
  Other components
   EJC/TREX
    101216563
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 101216563
NCBI-ProteinID: XP_004140691
UniProt: A0A0A0L734
Position
3:14412800..14418247
AA seq 424 aa
MGTNAADVEKTEDDLRKEIDELQRQQREITERLRDPRGLRRGGFPGPGPRNFAANGPRRG
FVRPGERNDAEDQPPAKRRLSSAVVKMAEDGEINEEAEGKDAVKDTSREETSGSDAVFQN
DARQNHLRQSGSFRLDGNKRARMDIDIPAAENVPRILPKNEDPSLVSRNKRMLGQLLGTL
EKFRKEDKQLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARVA
AKAEEKKLELLFLRWSEHHKKLCNFIRTKTEPSIYYLPNKPLDEDATLAEQQRDEAFMEW
KASRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGSNDVSNLQETMDKELDTHRLE
HGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLDVEENGRRGEETAKPEADVASPKAD
DTVQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggaactaacgccgctgacgtcgagaaaacggaggacgatcttcgcaaagagatcgat
gagcttcaacgtcaacaacgggagattacagaacgccttcgtgatcctcgcggactccgg
agaggtggatttcctggacctggcccaagaaacttcgccgctaatggaccacgtcgggga
tttgttcgacctggggaaagaaatgatgctgaagaccagcctcctgctaaacggcggcta
tcttctgctgttgtcaagatggcggaggacggggagataaatgaagaagctgaaggaaag
gatgcagtgaaggatacatctcgggaagaaacttctggaagtgatgcagtcttccagaac
gatgcaagacaaaatcatttgcggcaaagtggttcgtttagattggatggaaataaaaga
gctaggatggatattgatattccagctgctgagaatgttccaagaatattgcctaagaat
gaggatcctagcttagttagcaggaacaagagaatgctgggtcagcttttgggaacattg
gagaaattcaggaaggaagacaagcaactctcaggaacggaagcttttatgagaagatcg
gattccttacaaagagccgagcaaagagcacgagaggaaagcgaaagattgaggcaacaa
gagcgtgaacagattgcagagaaacgaaagagagatctgatgcttagagctcgcgtggct
gccaaggcagaagaaaagaagttggaattactttttcttcgatggagcgagcaccataag
aaactttgcaattttataaggacaaagactgagccttcaatttattatttgccaaataaa
ccattggatgaggatgcaaccttggctgagcagcaaagagacgaggcttttatggaatgg
aaagcctccagaagggaggagttatctgagtatcagaaacagataggagaacagtacatt
gcaaatgttgagaaggacttggaaaggtggcaaaatgctaggagggcaagaaaaggaagt
aacgacgtatcgaatttgcaagaaaccatggacaaagaattggacactcatagacttgag
catggtccaaagaaaaggaacatccctggtggtagcaacaacgaggatgaagatgacgtg
gaagatattaacgttggggaggacgacatgatagatgacgtactcgatgttgaagaaaat
gggcgcaggggcgaggaaacagcaaaacctgaagctgatgttgcaagtccaaaagctgat
gatactgtgcagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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