KEGG   Cucumis sativus (cucumber): 101217340
Entry
101217340         CDS       T02486                                 
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101217340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101217340
Enzymes [BR:csv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     101217340
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     101217340
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2
Other DBs
NCBI-GeneID: 101217340
NCBI-ProteinID: XP_004137491
UniProt: A0A0A0LQF9
Position
1:complement(4417279..4423115)
AA seq 748 aa
MGSPALCGRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEV
LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TREEDFFGELHKMLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLD
ISQDSILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGF
LGGINWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPR
RNPKDRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFE
PYPFFEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFS
DKSRPFHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKR
RSIPNFVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRID
DNANTNLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLADVSSQN
NGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQDFPCETEELEDFDY
NNQAKDFGATKQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYNGGLEELEPAEIVAPL
STGTAPVAERKPIIRLSFTSLGKAGKSS
NT seq 2247 nt   +upstreamnt  +downstreamnt
atggggagccctgcattatgtggccggaataatgggcagcagcggttaggcattactgat
cccatttcgttgagtgggccgacggagtatgatgtgctaaagactcgcgaactcgaaaag
tatttgcaagatgctggattgtacgagagtcaggaggatgccgtgaatagagaagaagtt
cttgggaggcttgaccagattgtgaagatttgggttaaagcaattagtcgtgcaaagggg
ttgaatgagcaactagtacaagaagccaatgctaagattttcacgtttggttcatatcgt
ttaggggtacatggccctggtgcagatattgatacgctgtgtgtgggacctagacatgca
acacgtgaagaagacttttttggtgagctacataaaatgctatcagagatgcctgaagta
tccgagttgcaccctgtgcctgatgctcatgtccctgtgatgagatttaagttatccggg
gtttccattgatcttctctatgcaaaattgtcactatgggttattcctgaagacttggat
atatctcaggattcaatacttcaaaatacagatgaacagacagttcgtagtttaaatggt
tgtcgagttactgatcgaattctgcgattagttccaaatattcagagttttcgaacaaca
ttgagatgcatgaggttttgggcaaaacgccgaggtgtttattccaatgtttctggattt
cttggtggtataaactgggcattacttgttgctcgcatatgccaactataccccaatgca
ttgccaaatatgctcgtgtctcgttttttcagggtcttcacccagtggcgctggccaaat
ccagtcatgctctgtgctaatgaagagggatctcttggacttcaagtttgggatccaaga
agaaatccgaaggatagataccatttaatgcctataattactcctgcttatccttgcatg
aattctagctacaatgtttcagcaagcactctgcgtatcatgaccgaagaatttcgaagg
ggacatgatatttgtgaggttatggaagaaaacaagagcgattgggacacactttttgag
ccctaccccttcttcgaagcatacaaaaactacttacaaatagacattactgcagaaaat
gatgatgatataagaatttggaaaggttgggttgaatctcgccttcgccaactgacattg
aagattgagagacatacgtataacatgcttcaatgccatccatatcctggagatttttcg
gacaaatccagacctttccaccattgctattttatgggtttgcagagaaaacaaggaggt
cctgcaagtgggggtgaacagtttgatataaggttgacagttgatgaatttaagcattct
gtcaatgtgtatacacagcggaagcgtgggatggagatttatgtatcgcatgtgaaaagg
aggagtataccaaattttgtctttccaggtggagttcgaccatcacgtgcatcaaaattg
acttgggatattaggcgtagttcagaactaaaagcttctgacagtactcaagttgacagc
ccatctgaagctacagaaagtttagatggggatgatagaaggaaaagaatacgtattgat
gataatgcaaatactaacttgagaaatggagagtgcttggctatggctcattcccacccc
gaggaagttcacgaagtcagccaagtcagcaacactagctcatgttccattaaggatgtg
aattttattcccaccagtgcaaataacttagaaaatctggcagatgtttcttctcagaat
aatggagatcatggatcgttacgagttagtccctccaccaacaatgtatcagatgctgct
gctgatacatcaaattgtaaagaagcagagaagttggcaattcaaaaaattttgtccgac
tcatatgactctcaccaagattttccttgtgagactgaagagctggaagattttgactat
aataatcaagctaaagattttggggccactaagcaaggtagccccatgatgtcttctgtt
gcaaacacatctcccttagtactgcctacggtatcttgcaatgaagcacgccagtcctca
agttcatattacaatgggggcttagaagagcttgagcctgctgagattgtggcgccattg
tcaactgggaccgcacctgtagctgagcgaaagccaatcatcaggttaagcttcacttcc
ttgggaaaagctggtaaaagctcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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