KEGG   Cucumis sativus (cucumber): 101219867
Entry
101219867         CDS       T02486                                 
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    101219867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csv03009]
    101219867
Enzymes [BR:csv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     101219867
Ribosome biogenesis [BR:csv03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    101219867
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 101219867
NCBI-ProteinID: XP_004136640
Position
3:complement(33063086..33065575)
AA seq 275 aa
MVRPFAAKGKKRKKSEKYDRDEDAEESTSPSKKVMLENEPDEEPAKEDFHELEGIPIAPK
DPKNDSNAGVIFILERASLEVAKVGKNYQLLNSDDHSNYLRRNNRNPGDYRPDILHQALL
AIFDSRIAKAGRLKVVYVKTEKGLLIEIKPYVRLPRTQKRFYGVMLQLLQKLSITAAGKR
EKLFRVIKNPVTQYLPANCRKMGFSHSSDKLVKVRNYLDAVKDDVDLVFVVGAMAHGKIE
TDYTDDLLAISEYPLSASCCIADICKDLAEKWNVG
NT seq 828 nt   +upstreamnt  +downstreamnt
atggttcgaccatttgcggcgaaggggaagaagagaaagaagtcggagaaatacgacaga
gacgaagatgccgaagaatccacctctccgtccaagaaagttatgttggagaacgaacct
gatgaagaaccagccaaggaggactttcatgaacttgaaggtattcctattgctccgaaa
gaccccaagaatgatagcaatgctggtgttatcttcatccttgaaagagcttctctggaa
gttgccaaagttgggaagaattaccagctgttgaattctgatgaccactccaattatttg
cggaggaataacagaaatcctggggattatagacctgatatcttgcatcaagcgcttttg
gcgattttcgatagccgaattgcaaaggctggaagattgaaagttgtttatgtgaaaact
gagaaaggtttattaattgaaattaaaccatacgttcgtcttccaaggacgcagaaacga
ttttatggagttatgttgcaattgctacaaaagttaagcatcacagctgcgggtaagcgt
gagaaactctttcgggtgataaagaaccctgtaactcagtacttacctgccaattgtcgt
aaaatgggcttctcgcatagttcggataagttggtcaaggtgcgaaattatctggatgct
gtcaaagatgatgtagaccttgtttttgtggtgggtgcaatggctcatgggaaaattgag
actgattacacggatgatctattagcaatttctgaatatcctcttagtgctagttgctgt
attgcggatatttgcaaagatttggcagagaaatggaatgtagggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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