KEGG   Corynebacterium singulare: CSING_02165
Entry
CSING_02165       CDS       T03630                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
csx  Corynebacterium singulare
Pathway
csx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CSING_02165 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csx03021]
    CSING_02165 (rpoC)
   03400 DNA repair and recombination proteins [BR:csx03400]
    CSING_02165 (rpoC)
Enzymes [BR:csx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CSING_02165 (rpoC)
Transcription machinery [BR:csx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CSING_02165 (rpoC)
DNA repair and recombination proteins [BR:csx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CSING_02165 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AJI77987
UniProt: A0A0B6EN92
Position
447246..451241
AA seq 1331 aa
MFDVNLFDELRIGLATAEDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVESEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLESEAEELKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGEDEIGGA
GAYAPANENGPAQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIEAEQFPDGWQ
KGQAWMAETTLGRIMFNDLLPWNYPYLEGVMVRKGGSANKMLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMHDVLVLPNKTEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGEAVENMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGVETTPGNYDLHELWETSASGRVVAGDVKDENGEVLAEAGADLTEELS
RKIVAAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVTTGDRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
QLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLEEDYTF
NT seq 3996 nt   +upstreamnt  +downstreamnt
gtgtttgacgtaaatctcttcgacgagctccgtatcggtctggccaccgccgaggacatc
cgccgctggtctaagggcgaggttaagaagcctgagaccattaactaccgaaccctcaag
ccagagaaggacggcctcttctgcgagcgcatcttcggtccgacccgcgactgggagtgc
tcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgcggcgtc
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacatcgagctggccgcgccg
gttacccacatctggtacttcaagggtgttccttcccgtctgggttacctgctggacctg
gctccgaaggatcttgagcgcatcatttacttcgctgccaacatcatcacctccgtggac
gaggaagctcgccacaatgatcagtccactcttgaggcagaaatgcttctggagaagaag
gacgtagaggatgacgtcgagtccgagatcgctgagcgcgctgccaagctcgagcaggat
ctggctgagctggaagccgccggcgctaaggccgacgcccgccgcaaggtccagaacgct
gccgacaaggagatgcagcacatccgcgagcgcggtgagcgcgaggtcgctcgcctcgac
gaaatctggaacaccttcatcaagcttgctccgaagcagatgatcatcgatgagaccatc
tacgaagagctcgttgaccgctacgaggattacttcaccggcggtatgggtgctgaggcc
atccagaccctcatccgcaacttcgacctcgagtctgaggccgaggagctcaaggaaatc
atcaacaacggcaagggtcagaagaagatgcgtgccctgaagcgcctcaaggtcgtcgcg
gccttcttgcgctcgggcaacgacccggccggcatggtgcttgacgctatcccggtgatc
ccaccggagctgcgcccgatggtgcagctggacggtggccgcttcgccacctccgacctc
aacgatctgtaccgccgtgtgattaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcg
ctcttcgacaacggccgtcgcggccgtccggtcaccggcccgggcaaccgcccgctgaag
tcgctgtctgacctgcttaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtcgactactctggtcgttccgttattatcgttggtccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggctctggagctgttcaagcccttcgtcatgaagcgtctg
gtggagaacgactacgcccagaacatcaagtccgccaagcgcatggtggagcgtcagcgc
cctgaggtgtgggacgttcttgaagaggccatttctgagcacccagtcatgctgaaccgt
gcgccgaccctgcaccgcctgggtattcaggccttcgagccgaagctcgttgagggtaag
gcaattcagctgcacccgctggcctgcgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccactgtccgctgaggcacaggctgaggcccgcgttctcatgctg
gcgtccaacaacattctgtctcctgcatccggtaagccgcttgcgatgccgcgtctggat
atggtgaccggcctgtactacctcaccatggacaagggcgaggacgagatcggtggcgcg
ggagcttacgctcccgcaaacgagaacggaccggcacagggcgtgtactcctcctacgca
gaggccatcatggctcgtgaccgtggcgtactgggcctgcaggccccgatcaaggtccgc
atttctcacctgcgtccgccggcagacatcgaggcagagcagttccccgatggctggcag
aaggggcaggcctggatggcggagaccacccttggccgcatcatgttcaatgacttgcta
ccgtggaactacccgtaccttgagggcgtcatggtccgtaagggcggttccgccaacaag
atgctcctcggtgacgtcattaatgaccttgctgcgaagtacccgatgatcaccgttgcc
caggttctggacaagatgaaggacgctggcttctactgggctacacgttctggcgtgacc
atcaccatgcacgacgttctggtcctcccgaacaagaccgaggttctcgagtcctatgag
aaggaagcagagcgcatcgagcgcaagtactgggagcagggtgctctgaccgagcgcgag
cgctacgaccgcctggttgagctctggaaggacgctaccgacaccgtcggtgaggccgtc
gagaacatgtacccggatgacaacccgattccgatgatcgttaagtccggtgcagccggt
aacatgcgtcagatctggaccctggccggtatgaagggcatggttgtgaactccaagggt
gactacatcacccgtccgattaagacctccttccgtgaaggtctgtcggttctggagtac
ttcaacaactcccacggctcccgtaagggtctggccgataccgctctgcgtaccgccgac
tctggttacctcacccgtcgtctcgtcgacgtggcacaggacgtcatcgtccgcgaagag
gactgtggcacccgtcagggtgtgcgcgtcccgctcggtgtcgaaaccaccccgggcaat
tacgatctgcacgagctgtgggagacctccgcatccggccgcgttgtcgcaggcgacgtc
aaggatgagaacggcgaggtgctcgctgaagctggcgcagacctcactgaggagctcagc
cgcaagatcgtcgccgctggtgttctggagatcaaggttcgctctgtgctgacctgccag
accccggccggtgtgtgcgcgaagtgctacggcaagtccatggcttctggccagctcgtt
gatatcggcgaggctgtcggtattgtggccgcccagtccattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggtggtctgccg
cgtgttcaggagctcttcgaggcccgtaacccgaagaaccgcgccccgattgcatccgtc
gacggcaccgtgtccctgtccgatgagggcaacttctggactctgaccatcactccggat
gacggttccgacaacgtggtttatgagaagctctcgaagcgtcagggcctggctcaggtc
cgtcgtccgatggagtcgaacccggatgccatgatcgagcgttctttgcgcgatggtgac
cacgtaaccaccggtgaccgcctcatgcgcggtgccgctgatccgcacgatgtgcttgag
gttctcggccgccgtggtgtggagaagcacctcattgatgaggtccaggctgtctaccgt
gcacagggtgtggccatccacgacaagcacattgagatcatcatccgtcagatgctgcgt
cgcggtaccgtcatcgacgctggtaccaccgacctgctgccgggtaacctcattgacctt
tcggaggccaagcaggtcaacgccgctcaggttgctgagggtggtcagccggctcagctg
cgcagtgagatcatgggtatcaccaaggcctcgctggctacggagtcctggctgtctgcg
gcttccttccaggagaccacgcgcgtgcttaccgacgccgccatcaacaagcgctcggat
cagctcatcggtctgaaggagaatgtcatcatcggtaagctgattccggccggtaccggt
atttcccgctaccgcaacatcagcgttaagccgaccgaggctgcacgcaatgctgcgtac
tccattccgacctacggtgattccatctacggcgacgatggcttcggtgagttcaccggc
gcctccgtgccgctggaggaggattacaccttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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