KEGG   Clostridium taeniosporum: BGI42_01220
Entry
BGI42_01220       CDS       T04957                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ctae  Clostridium taeniosporum
Pathway
ctae03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ctae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BGI42_01220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctae03021]
    BGI42_01220
   03400 DNA repair and recombination proteins [BR:ctae03400]
    BGI42_01220
Enzymes [BR:ctae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BGI42_01220
Transcription machinery [BR:ctae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BGI42_01220
DNA repair and recombination proteins [BR:ctae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BGI42_01220
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: AOR22431
UniProt: A0A1D7XGE7
Position
247580..248527
AA seq 315 aa
MLEIEKPIIECIEASEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVATSSIKIDG
VLHEFSTVKGVKEDVTELILNIKSLALRMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKDLHIATLDDGGRLYMELTVNRGRGYVTQNKNKSDDLPISAIAVDSIYTPVKKVNFTV
ENTRVGQITDYDKLTLEIWTNGTIKIDEAISLSAKILIEHFKLFMSLTSNTNDVEIMIEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLCLKLNDE
NT seq 948 nt   +upstreamnt  +downstreamnt
atgttagaaatcgaaaagccaataatagaatgtatagaagctagtgaagatggaacttat
ggaaaatatgttgttgaaccacttgaaagaggatatggtattacattaggtaatgctcta
agaagaatactattatcatctcttccaggagtagcaactagttctattaagattgatggt
gttcttcacgagttttctactgttaaaggagttaaagaagatgtaacagaattaattctt
aacattaaatctttagctttaagaatgaatggtgaaggtcctaaagttatctatattgat
gctaaaggtcctggtgaagttactggagcagatataaagactgatggagacgttgaagtt
gttaataaggatttacatatagcaactttagatgatggcggaagactttatatggaatta
acagttaatagaggaagaggttatgttactcaaaataaaaataagagtgatgatttacca
atttcagcaatagctgttgattctatctatacaccagtaaagaaagttaattttacagtt
gagaatactagagtaggtcaaattactgattatgataaattaactttagaaatatggact
aatggtactataaagattgatgaagctataagcttatcagctaaaatccttatagaacat
ttcaaattatttatgtcattaacaagtaatactaatgatgttgaaataatgatagaaaaa
gaagaagataaaaaagaaaaagtactagaaatgactgtagaagaacttgatttatcagtt
agatcatataactgtttaaagagagctggaattaacacagtacaagaacttgctactaaa
tcaatggatgatatgatgaaagtcagaaatctaggaaagaaatctttagaagaagttgaa
agaaaacttaaagaattaggtttatgcttaaaactaaacgatgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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