KEGG   Chryseobacterium taklimakanense: 4412677_01067
Entry
4412677_01067     CDS       T05512                                 
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
ctak  Chryseobacterium taklimakanense
Brite
KEGG Orthology (KO) [BR:ctak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctak03009]
    4412677_01067 (rimO)
Enzymes [BR:ctak01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     4412677_01067 (rimO)
Ribosome biogenesis [BR:ctak03009]
 Prokaryotic type
  ribosomal protein modification factors
   4412677_01067 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 CLP1_P TRAM TMF_TATA_bd
Other DBs
NCBI-ProteinID: SNV42316
UniProt: A0A239X7D2
Position
1:complement(1108632..1109933)
AA seq 433 aa
MRTKSTGTKKINIITLGCSKNVVDSEVLMGQLQAGGKEVVHEDRGDIVVINTCGFIDNAK
EESVNTILDAVEAKERGEIEKVYVMGCLSERYKPDLEREIPNVDQYFGTRDLPLLLKQLG
ADYKHELVGERLTTTPKHFAYLKISEGCDRPCSFCAIPLMRGGHVSKPIENLVMEAENLA
KKGTKELILIAQDLTYYGLDIYKKRALADLLLRLVKVEGIEWIRLHYAFPSGFPEDVLEV
IKNEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLAKFREKVPDMAIRTTLIVGYP
GETEERFQELKAWVAEQRFDRLGCFTYSHEENTSAYQLVDDVPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKVFKCIFDRKEANYFVGRTEFDSPDVDNTVLVPAENTYISIGDFAEVRM
TSSEEFDLYGELV
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgcgcacaaaatcaacaggaacaaaaaaaataaacatcatcactttaggctgctccaaa
aacgtagtggattctgaagtcttgatgggacagctacaggccggcggtaaggaagtggtt
cacgaagaccgcggcgacattgtcgtcatcaatacctgcggatttatcgacaatgccaag
gaagaaagcgtgaacaccattttggatgcagtggaagccaaagaacgcggcgagattgaa
aaagtctatgtcatgggttgcctttcggagcgttataaaccggatctggaaagagaaatc
cccaatgtggaccaatattttgggacgcgggatttgccgctgttgctgaagcagctcggc
gcagattataaacatgaactggtgggggagaggcttaccaccacacccaaacattttgcc
tacctgaagatttccgaaggctgcgaccgcccctgttcattctgtgcgattccgttgatg
cgcggcggacacgtttctaaacccattgaaaatttggtgatggaagctgaaaatctggct
aagaaaggaacgaaagagctgatcttaatcgcacaggatttaacctattacggactggat
atttataagaaaagagccctggcggatttgcttctgaggcttgtaaaagtggagggcatt
gaatggatccggctgcattacgcttttccttccggtttccctgaagatgttctggaggtg
attaaaaatgagccgaaagtctgcaactatatcgatattccgctgcagcacatcaattcg
gatttgctgaaatccatgaaacgcggaaccacccatgaaaaaacggatgcccttttggca
aaattccgtgagaaagtgccggatatggcgatccgtaccacgctgatcgtgggttatcca
ggggaaaccgaagagcgtttccaggaactgaaagcctgggtggcggaacagcgtttcgac
aggctgggctgttttacttattctcatgaggaaaatacctccgcttatcagcttgtagat
gatgtgccgcaggaagtgaaggaagcacgcgttgaggaaatcatggaactgcagtcgcag
atatcatgggaaaagaatcaggagaagatcggtaaagttttcaaatgcatcttcgaccgt
aaagaagcaaattatttcgtaggccgcaccgagtttgattctccggatgtggacaacacc
gtgctggtgccggcagaaaatacctatatctccatcggtgattttgcagaggtgagaatg
acttcatcagaagaatttgatctgtatggcgaactggtataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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