KEGG   Chlamydia trachomatis E/C599: EC599_5091
Entry
EC599_5091        CDS       T03168                                 
Symbol
rho
Name
(GenBank) transcription termination factor rho
  KO
K03628  transcription termination factor Rho
Organism
ctec  Chlamydia trachomatis E/C599
Pathway
ctec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EC599_5091 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctec03021]
    EC599_5091 (rho)
   03019 Messenger RNA biogenesis [BR:ctec03019]
    EC599_5091 (rho)
Transcription machinery [BR:ctec03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EC599_5091 (rho)
Messenger RNA biogenesis [BR:ctec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EC599_5091 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB Mor AAA NACHT DUF5855 Spore_III_AA
Other DBs
NCBI-ProteinID: CDG43390
Position
complement(567333..568727)
AA seq 464 aa
MKEESPAEVLQKVKEHKRREGPLSLEKEVSEDSVVATEEKETSQPVAVTKIAKLQRMGIN
ELNVLARQYGVKNVGSLTKSQVVFEIVKAKSERPDEFLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIVGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLHPNERLIMEMGKENLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDAELIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPDRHIQVTEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRHLSDRRIYPAIDLIKSGTRKEELLYHP
GELEKIRLFRQAIAGLTAIDAMHLLLGRLKKTNSNTEFLLSLKD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagaagagagtccagccgaggtcttacaaaaggtaaaggagcacaagaggcgcgag
ggccctttatcgttggaaaaagaagttagtgaagacagtgttgttgctacagaagagaaa
gaaacctcgcaaccagtagcagttacgaagattgctaaactacagcgtatgggcattaat
gagctgaatgttttagctcggcaatatggagttaagaatgtaggttctctgacgaaatcg
caggtagtgttcgaaatcgttaaggctaaatctgaacgccctgatgaattcttgattgga
gaaggtgtcctggaggttctcccggatggttttggatttcttaggtctcccacttacaac
tatcttccttccgcagaagatatctatgtttctcctgcgcagatccgtcgtttcgatttg
aaaaaaggagataccatcgttgggacgatccgttctcctaaggaaaaagagaaatatttt
gcgctgttgaaagtggataagattaatggctcaacgcctgataaggcaaaagagcgtgtt
ttattcgagaacctaacgcctcttcatcctaatgaacgattgatcatggagatggggaaa
gagaatttagcagagcgagtattagatttaacagctccaatcggtaagggacaacgaggg
ttgatcgttgcgcctcctcgctcaggtaagacggtaatcttgcaaagcattgcacatgct
attgctgtgaataatcctgacgcagagctgattgttttgctaattgatgagcgtcctgaa
gaggtgacggatatgattcgtcaggttcgaggggaggtcgtcgcctcgacatttgatgaa
caacctgatcgacacattcaggttactgaaatggtgatcgaaaaggcaagacgtttggtt
gaacacggtaaggatgttgtgattctattagattcgattacgcgtctagctcgtgcatac
aatactgtgcagccgcattcagggaagatcctcactgggggagtagacgctagcgcgtta
cataaacctaagcgtttcttcggtgcagctagaaatattgaaggcggaggatcgttaact
atcttggccacagcgttgattgatacaggatcaagaatggacgaagtgatctttgaggaa
ttcaaaggaactgggaatatggagttggttcttgaccgtcatctttctgatcgcagaatc
tatccggctatcgatttgattaagagtggaacacgaaaagaagaattgttgtaccaccct
ggagagcttgagaaaattcggttgttccgacaagctatagctggtttaacagcaatagat
gctatgcatttactgctaggccgtttgaaaaagacaaatagcaatacagaattcctgtta
tccttgaaggattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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