KEGG   Yamadazyma tenuis: CANTEDRAFT_119373
Entry
CANTEDRAFT_119373 CDS       T03099                                 
Name
(RefSeq) DNA repair helicase rad25
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
cten  Yamadazyma tenuis
Pathway
cten03022  Basal transcription factors
cten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CANTEDRAFT_119373
  09124 Replication and repair
   03420 Nucleotide excision repair
    CANTEDRAFT_119373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    CANTEDRAFT_119373
   03400 DNA repair and recombination proteins [BR:cten03400]
    CANTEDRAFT_119373
Enzymes [BR:cten01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CANTEDRAFT_119373
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CANTEDRAFT_119373
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CANTEDRAFT_119373
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-GeneID: 18248697
NCBI-ProteinID: XP_006684933
JGI: Cante1_119373
UniProt: G3AZV1
Position
Unknown
AA seq 829 aa
MSRRNKTVNYNELNNGNFSDVSISDEEDGDYTSSKKRPSPSQSAPERKRKPEQSIEALKA
SLSNKDFDEDDLIQLTPDIPQDYVPDAVSKTFGKSDFSYLRLKPDHFSRPIWISPKDGRI
ILESFSPLAEQAQDFLITIAEPVSRPSHIHEYKITPYSLYAAVSVGLETDDIIQVLNRLS
KVPVAESITNFIKGATVSYGKVKLVLKNNRYFVESAQADVLQMLLKDPVIGPLRINSEST
VDSNGLVKLAAPTQGDLKIAGSSNKPDDNKNKDTTEDIFASVVGNKTSEEDFDDDMDTVH
SFEIANDSVEIIKKRCQEIEYPVLEEYDFRNDQRNPDLEIDLKPSTQIRPYQEKSLSKMF
GNGRARSGIIVLPCGAGKTLVGITAACTIRKSVIVLCTSSVSVMQWRQQFLQWSTIQPES
VAAFTSENKEMFSTDAGLVVSTYSMVANTRARSYDSQKVMDFLTSREWGFIILDEVHVVP
AVMFRRVVTTIAAHSKLGLTATLVREDDKIYDLNFLIGPKLYEANWMDLAQKGHIANVQC
AEVWCPMTSEFYQEYLRETSRKKMLLYIMNPTKFQACQFLIHYHEKRGDKIIVFSDNVYA
LQEYALKLGKPFIYGATSQQERMKILQNFQHNDQVNTIFLSKVGDTSIDLPEATCLIQIS
SHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQAFLVDQGYAFK
VITHLNGMEQLPNLAYSTARERRELLQEVLLKNEDAAGLEIGDDADTTFAREGRIKTEGS
SSVKSAGSLAGLAGGEDMAYLEYGKNKNKEIRQQRNPLINKLYYSKKKS
NT seq 2490 nt   +upstreamnt  +downstreamnt
atgtcacggaggaacaaaacagtcaactacaacgagctcaacaacgggaacttctcggac
gtctcgatctctgacgaagaggacggtgattacacttccagcaagaagaggccttctccc
agtcagtctgcacccgagagaaagagaaaaccagaacaaagcatagaagcactcaaggcc
agtctaagcaacaaggactttgatgaagacgacttgatccaattgacgccggatattcct
caggactacgtgcccgatgcggtttccaagacgtttggaaagtcggacttttcatatctc
aggttaaagcctgaccatttctccagacccatatggatctctcccaaggatggacggatc
atcttggagtcgttctcccccttagccgaacaggcacaagacttcttgatcacaattgcg
gagccggtgtcaaggccttcccacattcatgaatacaaaatcacaccttattcgctttat
gctgctgtgtcagtgggattggagacagatgatattatccaggtgcttaatagactctca
aaggttccagtagcagagtccatcaccaacttcataaagggggccactgtttcgtacggg
aaggtcaagttggtgttgaagaataatcgatatttcgtcgaaagtgcacaagcagacgtg
cttcagatgcttttgaaggacccggtgattggccccttgcgaatcaacagtgagagtact
gtcgattctaacggccttgttaagttggctgctcctactcaaggtgacttgaagattgcg
ggttctagcaacaagccagatgacaacaagaataaggatacaacagaagatatatttgca
tcggtggtagggaacaaaacgtcagaggaggactttgacgacgacatggacacagtgcac
tcatttgaaattgccaacgactcggtggaaatcatcaagaaacgatgtcaggaaatcgaa
tacccggtgttggaagagtacgatttcagaaacgatcagagaaaccctgacttggaaatc
gatctcaaaccctccacccaaatcaggccctaccaagagaaatcgttgtcaaagatgttt
ggtaatggcagagcccgttcgggaatcatcgtgctaccttgcggtgccggtaagacgttg
gttggaattactgctgcttgcaccattcgaaagtcggtgattgtgttgtgcacctcatca
gtgtcggtgatgcaatggagacagcagtttttgcagtggagtactatacagccggagtcg
gtggccgcgttcacgtcggagaacaaggagatgttttcgaccgatgctgggttggtggtt
tcgacttattcaatggttgcaaacacccgagccaggtcctatgactctcaaaaggtgatg
gactttcttacttcaagagaatgggggttcatcatcttggacgaggtgcatgtggtaccg
gctgtgatgttcagaagagttgttaccactattgcagcccactcgaaacttggtttaacg
gctactttggtgcgggaagatgacaagatttatgacttgaactttttgattggccccaag
ttgtacgaagccaactggatggatttggcacaaaagggccacattgccaacgttcaatgt
gctgaggtgtggtgtccaatgacgtcggaattttatcaagaatacttgagagaaacgtcg
aggaagaagatgttgttgtatatcatgaaccccacgaaattccaggcatgccaattctta
attcactatcacgaaaagagaggtgataaaatcattgtgtttagtgataacgtgtatgcc
ttacaggagtatgcgttgaagttgggaaaaccttttatctatggtgcaacttcacaacaa
gaacggatgaagatcttgcagaactttcagcacaatgaccaggtcaacacaattttcttg
tccaaggtgggtgacacttcgatcgatttgccagaagccacctgcttgatccagatctca
tctcactatgggtctcgtagacaagaagctcagagattgggtagaatcttaagagcaaag
agaagaaatgacgaagggtttaatgccttcttctactcattggtgtctaaggatacccag
gaaatgtactattcgaccaagagacaagcgttcttagtggaccaagggtatgccttcaag
gttatcactcatttgaatggaatggagcaattgcccaatttagcatattcaactgcacga
gaacgtagggagttgcttcaagaagtgttgttaaagaatgaggatgctgctgggttggag
attggtgatgatgctgatacaaccttcgcccgggaaggtagaatcaagaccgaaggtagc
agctctgtcaagagtgccgggtctttggcaggattggctgggggtgaagacatggcgtat
cttgagtacggtaagaacaaaaacaaggagattaggcagcagcggaatccgcttatcaac
aagttgtactattctaagaagaagagttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (22)   

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