KEGG   Yamadazyma tenuis: CANTEDRAFT_99937
Entry
CANTEDRAFT_99937  CDS       T03099                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit L
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
cten  Yamadazyma tenuis
Pathway
cten03020  RNA polymerase
cten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CANTEDRAFT_99937
  09124 Replication and repair
   03420 Nucleotide excision repair
    CANTEDRAFT_99937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    CANTEDRAFT_99937
   03400 DNA repair and recombination proteins [BR:cten03400]
    CANTEDRAFT_99937
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CANTEDRAFT_99937
  RNA polymerase III system
   RNA polymerase III
     CANTEDRAFT_99937
  RNA polymerase I system
   RNA polymerase I
     CANTEDRAFT_99937
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CANTEDRAFT_99937
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 18250889
NCBI-ProteinID: XP_006689754
JGI: Cante1_99937
UniProt: G3BEG5
Position
Unknown
AA seq 72 aa
MIIPIRCFSCGKVVGDKWETYLDLLQDENITEGDALDQLKLKRYCCRRMVLTHVDLIEKF
LRYNPLEKKDIN
NT seq 219 nt   +upstreamnt  +downstreamnt
atgatcattcctattcgttgtttttcttgtggtaaagttgtcggagacaagtgggagacc
tacttggacttgttacaagatgaaaacatcactgaaggtgatgcgttggatcagttaaaa
ttgaagagatactgttgcagaagaatggtgttgacccatgttgatttgatcgagaagttt
ttgcggtacaatccattggaaaagaaggacatcaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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