KEGG   Clostridium tetani 12124569: BN906_01667
Entry
BN906_01667       CDS       T02905                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
ctet  Clostridium tetani 12124569
Pathway
ctet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN906_01667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctet03019]
    BN906_01667
   03009 Ribosome biogenesis [BR:ctet03009]
    BN906_01667
Enzymes [BR:ctet01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BN906_01667
Messenger RNA biogenesis [BR:ctet03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BN906_01667
Ribosome biogenesis [BR:ctet03009]
 Prokaryotic type
  rRNA helicases
   BN906_01667
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_19 RuvA_C Flavi_DEAD
Other DBs
NCBI-ProteinID: CDI49664
Position
complement(1627220..1628665)
AA seq 481 aa
MEELSFESFGISEDILEALLKLGYKNPSKVQQKVIPVAIKNKDIIVKSKTGSGKTASFGI
PICENVDLEERKPQALVLTPTRELCIQVKEDIKNIGRFKRIKCSAIFGKQPFKTQALELK
QRTHVVVGTPGRTLDHIERGTIDLDKIKYFIVDEGDEMFNMGFIDQVESIMRKLPKKRVN
MLFSATIPEKIEKLCEKYMKSPVMIEVNPEEFTEEKIQHTYYEIEEKNKFDLLNKILITE
NPNSSIIFCRTQENVNKVAKLMKNKDYPCKALHGGMMQDKRIDIMNSFKRGEFMFLVATD
LAARGIDVENVTHIINYDIPMEKENYVHRTGRTGRAGREGCAISLVTPYEDRFFKQIEEY
IGFKIKLGDEITKESVENGEKAFIEKIKAMPKIKKQKADKLDKDITKIYLSAGKKKKIRP
GDIVGGITNISGVTPEDIGIIDIQDVCSYVDILNGKGKLVLEGLKSTTIKGKKLRAEKAT
K
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggaagaattaagttttgaaagttttggaataagtgaagatatactagaggcactatta
aaattagggtataaaaatccttcaaaggtacaacaaaaagttattccagtagctattaag
aataaagatataatagtaaaatcaaaaactggaagtggtaaaacagcgtcatttggaatt
ccaatatgtgaaaatgttgatttagaagagagaaagcctcaggcactagtgcttacacct
acaagagagctttgtattcaagtaaaagaagatataaaaaatattggaaggtttaaaaga
ataaaatgttctgcaatctttggaaagcaaccctttaaaactcaagctctggagctaaaa
caaagaactcacgtggtagttggaacaccgggtagaacattggatcacatagaaagagga
acaatagaccttgacaaaattaaatatttcattgtagatgaaggggatgaaatgtttaat
atgggatttattgatcaagttgaaagtattatgagaaagttacctaaaaaaagagttaat
atgcttttctctgctacaataccagaaaagatcgaaaaactatgtgaaaaatatatgaaa
tctcctgttatgatagaagttaatccagaagaatttacagaggaaaaaatacagcataca
tattatgaaattgaagagaaaaataagtttgatcttctaaacaaaatattaattactgaa
aatcctaatagttcaattatattttgtagaactcaagaaaatgtaaataaggttgcaaag
ctaatgaaaaataaagattatccatgtaaggctcttcatggtggaatgatgcaagataaa
agaatagatattatgaatagctttaaaagaggagaatttatgtttttagtagcaacggat
cttgcagcgagaggcatagatgtagaaaatgtaacgcatataataaactatgatatccct
atggaaaaggaaaattatgttcatagaactggcagaacaggaagagctggaagggaaggt
tgtgcaataagtttagttacaccttatgaagataggttctttaagcaaattgaagagtac
ataggctttaaaataaaattaggagatgaaattacaaaagaaagtgtagaaaatggagaa
aaagcatttattgaaaaaattaaagctatgccaaaaattaaaaagcaaaaggctgataaa
ttagataaggacataacaaaaatataccttagtgcaggtaaaaagaaaaaaataagacca
ggagatatagttggaggaattacaaatatttctggtgttactccagaagatataggtata
atagatatacaagatgtttgttcctatgtagatatattaaatgggaaaggaaaacttgta
ttagaaggattaaaatctacaactataaagggaaaaaagcttagagcagaaaaggcaact
aagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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