KEGG   Acetivibrio thermocellus ATCC 27405: Cthe_0208
Entry
Cthe_0208         CDS       T00474                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cth  Acetivibrio thermocellus ATCC 27405
Pathway
cth03410  Base excision repair
cth03430  Mismatch repair
cth03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cthe_0208
   03430 Mismatch repair
    Cthe_0208
   03440 Homologous recombination
    Cthe_0208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cth03400]
    Cthe_0208
DNA repair and recombination proteins [BR:cth03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Cthe_0208
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Cthe_0208
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Cthe_0208
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: ABN51449
UniProt: A3DBX0
Position
252608..254899
AA seq 763 aa
MKVRVNILNKGVSIPQEVLDACGGDELVARIFYNRGYKNPETIRQMLNPELYVPTKPDEF
PDMPRAVDRILRAADNEEKICVYGDYDVDGVTSTVTLVECLNFFTSKVVYHVPDRFTEGY
GMNEEIVRKLAQDGVSLIITCDCGISNVREITLAKELGMDVVLTDHHTVPDELPPADAIL
NPKLLEEGHRARNISGCGMVYFLCLALLEKKGFPDRAERFLDMLALSLIADVVSLNGENR
YLLQKALPALFNTRRIGLRQLLEVAERNGKLENEEDVAFQIAPRINAAGRMDTARLPVEL
FLCQDLEKARIMAEKIDSLNTERKRVQQSIVDEAVEMVETRKKNKTILVLYKEYWHHGII
GIAAGRICELYRKPAILFSLKEDGITAVGSARSIEEVNIYELIKECSGKLLKFGGHSQAA
GLSIRKDDIEEFISQIEMEAENRYFIKDMVNVNADMELGIEDINEELYDRIQSAGPYGEG
FEAPCFCIRNVIVLSDRMTEKKHHIMVLEDQKGNRIPAVKWFGEDESFEGRCFDVTCRIG
RNNYSKDAGIQLTLEYMVESFGKFKKLFEGEIIDERKTTVENLLRKYPNAQIFYEGLQTA
CPVENTIDRFSVKNCKELVFLSTPANTEIFKEVIALANPEKVIINFAVLSNYTFKGFVLN
LLGLIKHIIKRRDGRAYIDELSLKLCVEENIVKAGLKYLGSSGMLNYTLSDDEQKVYLSE
GKGVADRNAFMAKKNLSDALAEKNAYQQFILKMEIDKFREYLK
NT seq 2292 nt   +upstreamnt  +downstreamnt
ttgaaagtcagggtgaatatattaaacaagggagtttccattccgcaggaagtgctggat
gcttgcggcggtgacgagcttgtggcaaggattttttacaaccggggatataaaaatccg
gaaactataaggcagatgctgaatccagagctttatgtgccgacaaagccggatgaattt
ccggatatgcccagggctgtagacaggattcttcgtgctgctgacaacgaggaaaaaata
tgtgtgtatggggactatgatgttgacggtgttaccagtaccgttacccttgttgaatgc
ctgaatttttttacatcaaaggtggtctaccatgttccggacaggtttacggaagggtac
ggcatgaatgaggaaatagtgagaaaacttgctcaggatggcgtttcattaataattacc
tgtgactgtggaatttcgaatgtcagggaaataactcttgccaaggagctggggatggat
gtggtgcttaccgaccatcataccgttcccgacgaacttcctcctgccgatgccatatta
aatcccaagcttttggaagaggggcacagggcaaggaatatctccggctgtgggatggtg
tattttttatgccttgccttgcttgagaaaaagggctttcctgacagggcggaaagattt
ctggacatgcttgcgctatcccttatagcggatgttgtgagccttaacggagagaacagg
taccttcttcaaaaagctctgccggctttgtttaataccagaagaattgggctcagacag
cttcttgaggtggcggaaagaaatggaaagcttgaaaatgaggaagatgttgcatttcag
atagcgcccagaataaatgcggcgggaaggatggacacggcacggcttcccgtggagctt
tttttatgtcaggacttggaaaaagcacgcattatggctgagaaaattgactcactgaat
acagaaagaaaaagggtgcagcagtcaattgtggatgaagccgtggagatggtagaaaca
aggaaaaagaacaagacaattctggtgctgtataaagagtactggcatcatggtataatc
ggaattgctgccggaaggatttgcgagctttatcgaaagccggcaattctgttttcctta
aaagaagatggaattacggcagtaggttctgccaggtccattgaggaggtaaacatttac
gaactgattaaggaatgcagcggaaagcttttaaagtttggaggacactcccaggctgcc
ggactttcaataagaaaagatgatattgaggagtttataagccagattgagatggaggcg
gaaaacaggtattttataaaagacatggtgaatgtcaatgccgatatggaacttggcata
gaagatataaatgaagagctctacgacagaattcaatcggcgggaccttacggagaaggg
tttgaggctccttgtttttgcataagaaatgttattgttttaagtgacagaatgacggag
aaaaaacatcatataatggtattggaagatcaaaaaggaaacagaatacctgcagtcaag
tggtttggtgaggatgaatcctttgagggcaggtgttttgatgtaacctgcagaataggc
cggaacaattacagcaaggacgcgggtattcaactgactttggaatatatggttgaaagt
ttcgggaaatttaaaaagctgtttgaaggtgaaataatagatgagagaaaaacaactgtt
gaaaacctcttaaggaaatatcccaatgcccaaatattctacgaagggcttcagacggca
tgtcccgttgagaataccattgacaggttttcggtgaaaaactgtaaggagcttgttttt
ttgtccacccctgcgaatactgagattttcaaagaggttattgcccttgccaatccagaa
aaggtgataataaattttgccgtcctttcgaactatacctttaaaggctttgtattaaac
cttttggggcttataaagcacataataaagagacgggacggaagagcttatattgatgag
ctttctttgaagctttgcgttgaggagaacattgtaaaagcgggattaaaatatcttggc
tcttctggaatgttaaactatactttaagtgacgatgagcaaaaagtttatttgtctgaa
ggaaaaggtgtggctgacagaaatgcttttatggcgaaaaaaaacctttccgacgctttg
gcggaaaagaatgcctatcagcagtttattttaaagatggagatagataaattcagggaa
tatcttaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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