KEGG   Chroococcidiopsis thermalis: Chro_0448
Entry
Chro_0448         CDS       T02360                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
cthe  Chroococcidiopsis thermalis
Pathway
cthe03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cthe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Chro_0448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cthe03021]
    Chro_0448
   03400 DNA repair and recombination proteins [BR:cthe03400]
    Chro_0448
Enzymes [BR:cthe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Chro_0448
Transcription machinery [BR:cthe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Chro_0448
DNA repair and recombination proteins [BR:cthe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Chro_0448
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RnfC_N DUF2442 Peptidase_M23
Other DBs
NCBI-ProteinID: AFY85997
UniProt: K9TT41
Position
497299..500601
AA seq 1100 aa
MTTEISKESTSYLLPDLIEIQKASFRWFLEEGLIEELNSFSPITDYTGKLELHLLGQNYK
LKQPKYDVDEAKRRDATYAVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGA
ERVIVNQIVRSPGVYYKSELDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKL
SAQILLKALALTDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYKKLRPGEPPTVLGG
QQLLDSRFFDPKRYDLGRVGRYKLNKKLRLSIPDTTRVLTPTDILAAIDYLINLEFDMGN
TDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDTDNLSPTSLVNPKPLVAA
IKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPI
ETPEGPNAGLIGSLATHARVNQYGFLETPYREVKNGRVLYDGAPIYMTADEEDDFRVAPG
DVPIDEHGNLLGAQVPVRYRQDFTTTTPDQVDYVQVTPVQIVSVATSLIPFLEHDDANRA
LMGSNMQRQAVPLLKPERPLVGTGLEAQAARDSGMVIISRTDGEVSYIDATRIRVRAANG
SEIEYQMSKYQRSNQDTCLNQRPLVRKGDRVAAGQVIADGSSTEGGEIALGQNILVAYMP
WEGYNYEDAILISERLVQEDLYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDALRQLD
EQGIIRVGAWVESGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKG
RVVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPLEDMP
YLPDGRPVDIVLNPLGVPSRMNVGQVFECLLGWAGANLGLRFKLTPFDEMFGEEASRSIV
HGKLTQAREDTAQDWMYDPENPGKIQVFDGRTGEPFDRPITIGMAYMLKLVHLVDDKIHA
RSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEAL
NAIVKGKAIPRPGTPESFKVLMRELQSLGLDIAVHKVETQTDGSTSDVEVDLMADPAGRR
TPSRPTYESLSRESLEEEEI
NT seq 3303 nt   +upstreamnt  +downstreamnt
atgactacagagatatctaaagaatctacctcctacttgctgcccgacttgatcgaaatt
caaaaagctagttttcggtggtttttagaagaaggcttaattgaagaactcaacagcttc
tcaccaattaccgactacacgggcaaattagaactgcacttactaggtcaaaattataaa
ctcaaacagcctaaatacgatgtagacgaagccaagcgtcgcgatgctacatatgccgta
cagatgtacgtaccgacacgcttgatcaataaagagacaggcgagattaaagaacaagag
gtttttattggcgacctgcccctcatgaccgatcgcggtacgtttattattaacggcgca
gaacgggtaatcgtcaatcaaatcgtgcgatcgcctggagtctactacaaatcggaactc
gacaaaaacggtcgtcgcacctacagcgccagtttgattcctaaccgaggcgcgtggctg
aaatttgaaaccgaccggaacgatttagtttgggtacgcattgataaaactcgtaaactg
tcggcgcaaattttgttgaaagcacttgccctgacagataatgaaatttttgatgccctg
cgtcacccagaatatttccaaaaaacgatcgaaaaagaagggcagttttctgaagaagaa
gccctgatggaattgtacaaaaagctacgtcctggcgaaccaccaacggtattgggcggt
caacagctcctcgactcgcgctttttcgatcccaagcgctacgatttagggcgcgtcgga
cggtacaaactgaataaaaagctgcgcttatcgatccccgatacgacgcgggtactgaca
ccaacagatattttggcagcgatcgactacctgatcaacttagagttcgacatgggtaac
accgacgatatcgatcacttgggcaacagacgagtcagaagcgtcggcgagttgctgcaa
aaccaagtccgcgtcggcttaaaccgcttagaacggattatccgcgaacgaatgaccgtc
tcggatacagataacctcagcccgacttcattggtcaaccccaaacccctggtcgctgcg
attaaggagttttttggctccagccaactgtcacagtttatggatcagaccaacccctta
gcagaattgactcacaagcgccgcctctcagccctcggtcctggcggattgacgcgagaa
cgggcgggttttgccgtgcgagatattcacccctcgcactacgggcgtatctgcccgatt
gagactccagaaggtcccaacgcgggtctgattggttctttggcaacccacgccagagtt
aaccaatacggctttttagaaacgccttaccgcgaagtgaaaaacgggcgagtcttgtac
gatggcgctcctatttacatgacagccgacgaggaagacgattttcgcgtcgcacctggg
gacgtgccgatcgacgaacacggtaacttgctgggcgctcaagtccccgtgcgttaccgc
caagacttcaccaccaccacccccgaccaagtggactacgtgcaggtgacaccagtacaa
atcgtctctgttgccaccagcttgatcccgttcttggaacacgacgacgctaaccgcgcc
ctgatgggttctaacatgcaacggcaagcggttcccttactcaaaccggagcgaccctta
gttgggacggggctagaagcacaagcagcgcgggactctgggatggtaatcatcagccgt
actgatggtgaagtcagttatatcgatgccacccgcattcgcgtccgtgctgctaatggg
agcgaaattgaataccaaatgtccaaataccagcgctccaaccaggatacctgtctcaac
cagcgcccgctcgtccgtaaaggcgatcgcgttgctgccggacaggtaattgctgatggt
tcctcaactgagggcggtgaaattgctctgggacaaaatattttagttgcctatatgcct
tgggaaggctacaactacgaagatgcaattttgatctcggaacggttggtacaggaagac
ctgtatacctcaattcacgttgaaaagtatgaaattgaggcacgacagaccaaactcgga
cccgaagaaattacccgcgaaattcccaatgttggggaagatgccctgagacagttagac
gaacaaggaattatccgcgttggcgcttgggtagaatcgggcgatatcttagttggcaaa
gttacccccaaaggtgaatctgaccaaccaccagaagaaaaactgctacgggcaattttc
ggtgaaaaagcgcgggatgtacgcgataactcgctgcgcgtacccaacggcgaaaaaggt
cgtgtagtagacgtgcgcgtgtttacccgcgaacagggggacgaactaccccctggcgct
aacatggtcgtccgcgtgtatgtcgctcaaaagcgcaagatccaagttggcgacaaaatg
gcaggacgacacggcaataagggaattatttctcgcattttgcctttagaagatatgcca
tatttgccagacggcagacccgttgacatcgtgctgaatccattgggcgtaccttcccgc
atgaatgtgggacaagtgtttgagtgcctcttaggttgggcgggggctaacttgggtctg
cggtttaagctaactccattcgatgaaatgtttggtgaagaagcatcgcgatcgatcgtt
cacggcaaattgacgcaagccagagaagacaccgctcaagattggatgtacgacccagaa
aatccggggaaaatccaagtattcgacggcagaacgggagaaccattcgatcgcccgatc
acgattgggatggcttacatgctgaaactggtacatttggtagacgacaagattcacgct
cgttcaacaggtccttactccttggtgacgcaacaacccttgggtggaaaggcgcagcaa
ggcggtcagcgatttggcgaaatggaagtgtgggcgctggaagcattcggcgctgcctat
accctgcaagagctgctaacggtgaaatccgacgacatgcaaggacggaacgaagcctta
aacgcgatcgtcaaaggcaaggctatccctcgacctggcacgcccgaatctttcaaggta
ttgatgcgagagttgcaatctttggggctagatattgccgtgcataaggtagaaactcaa
actgacggcagtacctctgatgtcgaagtggatctgatggcagatccggctggtcgccgc
actccttcccgtcctacctacgaatctctcagtcgcgaatcgttggaagaagaagaaatt
tag

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