KEGG   Chroococcidiopsis thermalis: Chro_2595
Entry
Chro_2595         CDS       T02360                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
cthe  Chroococcidiopsis thermalis
Brite
KEGG Orthology (KO) [BR:cthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cthe03400]
    Chro_2595
DNA repair and recombination proteins [BR:cthe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Chro_2595
    Archaeal homologous recombinant proteins
     Chro_2595
SSDB
Motif
Pfam: AAA_23 SMC_N AAA_15 Rad50_zn_hook SbcC_Walker_B AAA_21 AAA_29 StiP RsgA_GTPase
Other DBs
NCBI-ProteinID: AFY88071
UniProt: K9U0U9
Position
2896250..2899276
AA seq 1008 aa
MIPVQLILKNFLSYRETTLDFSGLHIACICGSNGAGKSSLLEAITWAVWGQSRAVAEDDI
IHAGAKEVRVDFLFYSDRHKYRVIRTRYRGQSSSLEFQVETPQGFRSLTEKGVRATQSLI
LEHVKLDYETFINSAYLRQGRADEFMLKRPNERKEILAELLKLRRYDELEERAKDLSKSF
RAQADQLEQALQSLATQLQQQEAIATHLAEIEAQVNQLQQEQAFDDIQLKSLQVIRSQQQ
NWEQQLSFLKQQSQNLTVDRDRLQQEHLAIESQLAAVAEILNREPEIQAGYQHYQDLLGQ
EEEFSTKFQEYSHAQQQHTRLQQQLVQQVNELQRQLQRAEGQLVILQQQEQETQQALSKS
AEVEAGVLQLAAARDRLANLDRLQLQVSPLIQRRNTLQAQIDKVQARLTAKLEELETQQI
TLSQQQSTQSQLQQTATDVAVQIEQLEKDKVYIERVREKGQERRHFLERLQEQQREFEKQ
LGEVEQKIQMLSVPDAVCPLCERPLDEHHWNRVVDKTKEQKRDTEEQFIVVREQLVVTET
EIQELRRRYREVAQKLTQYDALREQRGQVIAQLSASDELQSRLEQIAAEKQHLERSLAQG
DYAADLQTELNQLNSQLQQLNYSEESHALARSEVDKLRWAEVRQAQIKDAQKRQAQIIAR
QPEMRTQIDDLSQQIEQYQVESECAKQIAAIADRIDEIGYDPDRHSTLRTAIRQAQVWQL
SYQQLLSAQEQYPQLEQRSRDLAEAVQARTAERQVLAVQIEEVIQKLEQSPNTTTEIQTL
ESQLAFRRRQLDDRLSQLGRLQQQSQQLAAMQAQQEQQQQQLQVARRQQRVYQELGQAFG
KNGIQALMIENLLPQLEAETNQLLARLSANQLHVQFITQKTGRSGRAAKKNAKTIDTLDI
LIADARGTRPYETYSGGEAFRINFAIRLALARLLAQRAGASLQLLIVDEGFGTQDQEGCD
RLIAAVNAIAADFSCILAVTHMPYFKEAFQARIEVVKTQNGSQLSLSM
NT seq 3027 nt   +upstreamnt  +downstreamnt
atgattccagtccaacttatacttaaaaacttcctcagttatcgcgagacgacacttgat
tttagcgggctacatattgcctgtatatgtggctcgaatggggcgggtaaatcatctcta
ctcgaagcgattacctgggcggtttggggtcagagtcgtgctgtagcggaagatgatatc
attcatgccggagcaaaagaagtacgggttgattttctgttttacagcgatcgccacaaa
tatcgcgtgattcgtacccgttaccgaggacaaagcagttccctagagtttcaagtcgaa
acgccacaaggctttcgctcgctaactgaaaagggagtccgagccactcagtcattaatt
ttagaacacgttaagctggactacgaaacatttattaactcagcgtatttgcgtcaggga
cgagctgatgaattcatgctcaagcgccccaacgaacgtaaagaaattttggcggagtta
ctgaaactgcgtcgttatgacgaactagaggaacgggcaaaagatctgtcgaaatctttt
cgcgctcaagccgatcaattagaacaggctttgcaatcgcttgccacccaactacaacaa
caagaagcgatcgccactcatctagcagaaattgaagctcaagtcaaccagttgcagcag
gaacaagcttttgatgacattcaactcaaaagcttacaagtcattcgcagtcaacaacaa
aactgggaacaacaattaagtttcctcaaacagcagtctcaaaatctaacggtggatcgc
gatcgcctccaacaagagcatttagcgatcgagtctcaactggcagctgtagcagagatt
ttaaatcgagagccggaaattcaagccggataccaacactatcaagatctcttagggcag
gaagaagaattcagcactaaatttcaggaatacagccacgcccaacaacagcacactcga
ttacagcaacaactcgtacagcaagtcaacgaacttcagcgccaattacaacgtgctgaa
ggtcagctagttattttacaacagcaagaacaggaaactcaacaagctctgagcaaatcg
gcggaagtagaagcaggagtcttacaactcgccgccgcccgcgatcgcttggcaaattta
gatcggctgcaactccaagtttctcctttgatccagcggcgtaataccctgcaagctcaa
attgataaagtccaagcgcggttaactgccaaactagaagaactggaaacgcaacaaatt
accttgagccagcagcaatcgactcagtcacagctacaacaaactgcgacagacgtagca
gtccaaatcgagcagctagagaaagataaagtctatatcgaacgggtacgggaaaaagga
caggaacgccgccattttttagaacgcctgcaagagcaacaacgagaatttgaaaagcaa
ttaggagaagtcgagcaaaaaattcagatgctctccgtaccagatgcggtgtgtcccttg
tgtgagcgtcctttggacgaacatcattggaatcgcgtcgtagacaaaactaaagaacag
aaaagggatactgaagaacaatttatagttgtccgagaacagttggtagtcacggaaact
gaaattcaagaactgcgacgacgatatcgggaagtcgcgcagaaactcacccaatacgat
gctttacgagagcaacggggacaagtcatcgcgcaactatctgctagcgatgagttgcaa
agtcgcttagaacaaattgcagcagaaaaacaacacctagagcgatcgctagctcaggga
gactacgctgccgatttacaaacagaattaaatcaactcaattcccaacttcagcaactc
aactacagcgaagaaagccatgctttggcgcggagtgaggtcgataaattgcgatgggca
gaagtgcgacaggcacaaattaaagatgctcaaaagcgacaggcacaaattatcgcccga
cagccggaaatgagaacgcaaattgacgatttgtctcagcaaatcgagcaataccaagtt
gagtctgaatgtgccaaacaaatagccgcgatcgccgatcgcatcgacgaaatcggttac
gatccggatcgacacagcaccctaagaacggcaattcgacaagcccaagtgtggcaattg
agctatcaacaactactctcagctcaagaacagtatcctcaactagagcagcgatcgcgc
gatttagctgaagccgtacaagctagaactgccgaacgccaagttcttgcggttcaaatt
gaagaagtgattcaaaagttagaacagtctcccaataccacaactgaaattcaaactcta
gaatcacaattggcgtttcgtcgccgccaactcgacgatcgcctcagtcagttaggacgc
ttgcagcagcaatctcagcaattagccgcgatgcaagctcagcaggaacaacagcagcaa
caactccaagttgctcgtcggcaacagcgagtttatcaagaattagggcaggcgtttggc
aaaaacggcattcaagcgctgatgattgaaaatctgttacctcaactggaagcagaaacc
aaccaattgttagcgcggctgtctgccaaccagttacacgtccaatttattacccaaaaa
accggacgtagcggacgcgcagcgaaaaaaaatgccaaaacgatcgataccttagatatt
ttaattgccgatgcacggggaaccagaccttacgaaacctactctggcggcgaggcattt
cggatcaattttgccattagactagccctggcgagattgttagcccaaagagcaggagca
tctttacaattattgattgttgatgaggggttcggcacgcaagaccaagaagggtgcgat
cgcctaattgccgccgtcaacgcgatcgctgctgacttttcctgcatcctcgcagtgacg
cacatgccctatttcaaagaagctttccaagcccgcatcgaagtcgtcaagactcaaaat
ggttcgcagttaagtttgtctatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (44)   

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