KEGG   Caldimicrobium thiodismutans: THC_0071
Entry
THC_0071          CDS       T04224                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
cthi  Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthi03032]
    THC_0071
   03400 DNA repair and recombination proteins [BR:cthi03400]
    THC_0071
Enzymes [BR:cthi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     THC_0071
DNA replication proteins [BR:cthi03032]
 Prokaryotic type
  DNA Topoisomerases
   THC_0071
DNA repair and recombination proteins [BR:cthi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      THC_0071
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_4
Other DBs
NCBI-ProteinID: BAU22477
UniProt: A0A0U4VZY4
Position
73948..75627
AA seq 559 aa
MTKKLNGKNKFLFIVESPSKIKTLSKILNNSGHSFLFLATFGHIKDLPIKSMGINPHTFD
PYLEVLNSKRAVLSKLKKLLSSVNKIYIATDPDREGEAIGYHLLEYIQKNQPFPLEIKRI
ELREITEIGIKNAFNNLRDIDENLYTAWKARRVLDRLIGYKVSPFLSKNFKKALSAGRVQ
SPALRLITEREKEIETFRPEKSYSLMVIAESSSGECFEIELFSKKELLKTKNSEGLLEIF
KEYLEGKEIELSSIKDKTLKKYPPQPLKTSTLIEVAGKFLGLSPKETMKIAQTLYEEGYI
TYMRTDSTRVSPLAKKEAKAYIERLFGKEYVGGERKVKLSAHAQDAHECIRPTQILRQTP
PIGKRERALYELIKRIFLASQMREAIYAERMYVFKNAYLPKDLKLILKRQKLVFDGYLLL
LGREEKEDKDFPDLREGDLLKIKGYKIKEHITKPPERYTPQSLIKKLEALGIGRPSTYAS
MLDILFTRGYIEEEGRYLKPTELGRRVCEFLERVTPLFMDYQFTANLEKALDEIAEEKRS
YYSTVKEVFEILEGYLSKR
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgactaaaaagcttaatggtaaaaataaatttcttttcattgttgaatcaccaagtaag
attaagactttaagtaaaattctaaataattcagggcattcctttctttttttagctacc
tttggacatattaaggatcttccaataaaaagtatgggaataaatccccatacctttgac
ccctatcttgaagttcttaattctaaaagagctgttttatctaaattaaaaaaacttctc
tcttcagtaaataaaatttacattgcaactgacccagaccgcgaaggtgaggctattgga
tatcatcttcttgaatatattcagaaaaaccaaccttttcctttagaaattaaacgcatt
gagcttagagaaattactgaaattggtatcaaaaatgcctttaataacttaagagatatt
gatgaaaatctttacactgcctggaaagcaagaagagtgcttgatagacttattggctat
aaagtatccccctttttatccaaaaattttaaaaaggccctttctgctggaagggttcaa
agtcctgctctaagacttattacagagagggaaaaggaaatcgaaacctttagaccagaa
aagagctattctcttatggtgatagcagagtcttcttcaggagagtgctttgaaattgaa
cttttctcaaaaaaagaattacttaaaactaaaaactcagaaggattattagaaattttt
aaagaatatcttgaaggaaaagagatagagctttcttctattaaagataaaaccttgaaa
aaatatccgcctcaacctttaaagacaagcactttgattgaagttgctggcaaatttttg
gggctttctcctaaggagaccatgaagatagctcagaccctttatgaagaaggatacata
acttacatgagaacagattcaacaagggtaagtcctttggctaagaaggaggctaaagct
tatattgagaggctttttgggaaagaatatgtgggaggtgagagaaaggttaagttatca
gcccatgcccaggatgctcacgaatgcataagaccaactcaaatcctgagacaaacacct
cctatagggaaaagggaaagagccctctatgaactcataaaaaggatttttcttgcctca
cagatgagggaggctatttatgcggagagaatgtatgtgtttaaaaatgcatatcttcca
aaggatctcaaacttattctaaaaaggcaaaagttggtttttgatggatatttacttctc
cttggcagggaagaaaaagaagataaagattttccagacctaagagagggtgacctctta
aaaataaaaggttataaaatcaaagagcatatcactaagccacctgagagatatactcct
caatctctaattaaaaaattggaggcccttggtattggcagaccttcaacttatgcaagc
atgcttgatattcttttcacaagaggttatatagaagaagagggaaggtatcttaaacca
acagagcttggcagaagggtttgtgaatttttagaaagggtaaccccactttttatggat
tatcaatttactgctaacctggaaaaagcccttgatgaaatagcggaggaaaagagaagt
tattattctacagttaaagaagtctttgaaatcttagagggttatctttcaaaaagatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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