KEGG   Caldimicrobium thiodismutans: THC_0928
Entry
THC_0928          CDS       T04224                                 
Name
(GenBank) hypothetical protein
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
cthi  Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cthi03009]
    THC_0928
Enzymes [BR:cthi01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     THC_0928
Ribosome biogenesis [BR:cthi03009]
 Prokaryotic type
  ribosomal protein modification factors
   THC_0928
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 Fer4_12 TRAM
Other DBs
NCBI-ProteinID: BAU23313
UniProt: A0A0U5AQY8
Position
complement(931691..932995)
AA seq 434 aa
MKRMKLVRSKTSKKVYPVSLGCPKNKSDFEKLLFLLNQKGYEFTLDPGEADLFWVNTCAF
IQPAVNEALEHIFELGELKTPHQKLIVSGCLPARYAIEDLKKLLPEVDEFYGIEPFRYFA
KEEPSDKVLSESPFYSYLKISEGCSHRCSYCTIPKIRGPFRSKPLELVLKEAENLLKKGV
RELIIVGQDITLYGRDLKESNLLIKLLKKISSLPFHFRIRLLYLHLLHLSDELIEAIFEI
PKVVPYFEIPIQHADSEILKKMHRGYTPERILKIIEKVRSFNSMATLRTSIIVGFPGEKE
KHFLNLITFLKEAQFDYLGVFPFYPEEGTPAEALPEQVPSKEKKRRVKEVLKVQKEITKK
RLNLRVGQRDEVLILGEDIKGRLFGLSTLQAPEIDGLTFLKRGINNLLPGNLVKVKILKS
GAYDLWAEPLDLRG
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaaaagaatgaagttagtcagatcaaaaacctctaaaaaggtttatcctgtaagtctt
ggttgcccgaaaaataagagtgattttgaaaaactgctttttcttttaaaccagaagggt
tatgagtttacccttgatcccggggaggcagatcttttctgggtgaatacctgtgccttt
atccagccagctgtaaatgaagcccttgaacatatctttgaattgggagagcttaaaacc
ccccaccaaaaactcattgtttcaggatgccttcctgccagatatgctattgaggacctg
aaaaaacttttacctgaggttgatgaattctatggtatcgagccctttcgctattttgct
aaagaagagccttctgataaagtgctttcagaaagccccttttatagctacttaaagatc
tcagagggatgtagtcatcgttgtagttattgcactattcccaaaataagaggccccttt
agaagtaaacccttggagttggttctcaaagaggcagaaaatctcctgaaaaaaggggta
agggagcttatcattgtgggtcaggatataaccttatatggtagggatcttaaggaatct
aatcttcttatcaagctccttaaaaaaatctcttctcttccttttcattttcgaataaga
cttctctatcttcatcttcttcatctgagtgatgagcttattgaggctatttttgaaatc
ccaaaggttgtgccctattttgagattcctattcagcatgctgattccgagattttgaaa
aagatgcatcgggggtatacccctgaaagaatcttgaaaataatagaaaaggtgcgctct
ttcaattctatggcaacccttcggacaagcattatagttggcttcccgggagagaaagaa
aagcacttcctcaatcttatcacctttcttaaagaggcccaatttgattacttaggggtt
tttcccttttatcctgaagaagggacacctgctgaggctcttcctgaacaggttccttca
aaagagaaaaaaagacgggtaaaagaggtcttaaaggttcagaaagaaataacaaaaaag
cgtttaaacttaagggttggtcaaagagatgaggttttaattcttggagaggatattaaa
ggtcggctttttggcctttctacactacaggccccagaaattgacggccttacctttctt
aaaaggggcatcaataatcttttacctggaaatttggtaaaggtaaaaattctaaaaagt
ggggcctatgacctctgggctgaacccttggatttaaggggatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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