KEGG   Caldimicrobium thiodismutans: THC_1474
Entry
THC_1474          CDS       T04224                                 
Name
(GenBank) polynucleotide adenylyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
cthi  Caldimicrobium thiodismutans
Pathway
cthi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cthi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    THC_1474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthi03019]
    THC_1474
Enzymes [BR:cthi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     THC_1474
Messenger RNA biogenesis [BR:cthi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     THC_1474
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd tRNA_NucTran2_2 HD
Other DBs
NCBI-ProteinID: BAU23839
UniProt: A0A0U5AZB1
Position
complement(1469674..1471128)
AA seq 484 aa
MVELSEKDKALFIELLTFPEKDRLLSQLRKFSHREDLFIVGGAVRDFLLGKRITDLDIAV
KYDIYALYQYLAEVLSFSPVPLSEEFGIYRLAKGGYTLDLTLYRGETIEEDLRERDFTFN
AMAIPLEGLFEGPFYLYDPFYGYSDLQKGIIRALGEENIKKDPLRILRGYRFYALNYGYL
EEKTRVYFQNQAQKLLLIAPERLSMELKYILISDKAYLAFKAMDEDRVLEILFPEIIPAK
GLPQPSFHHLDVFAHSLEALKWAEIILKEPKKYLGLNEIPEIFNEEDFVIAVKLGSFLHD
LGKGYTYGESEERITFYGHESKGAELWIARAKALRFKNEIADWVFSLIKNHMRPCHLLKE
WENKTLSARAKRNLLKAHSELFSLWIVAMADSLASRGPDKEKDYEEKLKAFFKDLLSFQQ
DLERVEKRERLITGKDLIAIGFKPGPLFKEILEEVEIKAIEGVLKTKNEAISYVLERYRK
ELPK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggttgaactttcagaaaaggataaagccctttttattgaattacttacctttcctgaa
aaggataggctattatctcaattgagaaagttttcccatcgagaagatctctttattgtt
gggggtgcggtaagggattttcttttgggtaaaagaattacagaccttgatatcgcagta
aaatatgacatctacgctctttaccaatacttagctgaggtgttatccttcagccctgtt
cccctttcagaagaatttggtatttatcgtttggctaaaggaggctacacccttgatctt
accctttatcgtggggaaaccattgaagaggatcttagagaaagagattttacctttaat
gccatggctattcctctggaggggctttttgagggccctttctatctttatgaccccttt
tatggttattctgacctccagaaaggaattattcgggccttaggagaagagaatataaaa
aaagatcccctacgaatcctcaggggatatcgcttttatgctttaaattatggttatctt
gaagaaaaaacgcgcgtatactttcagaatcaggctcagaagcttttactcatagcccct
gagagactttccatggaactaaaatatattttaatttctgacaaggcctatttagccttt
aaggccatggatgaggatagagttcttgagatactctttccagagataattccagcgaaa
ggccttcctcaacccagttttcaccacttagatgtctttgctcatagcttagaggcccta
aagtgggcagaaatcattcttaaagaaccgaaaaaatatcttgggctgaatgaaattccc
gaaatatttaatgaggaagactttgttatcgcagtgaaattaggaagttttttgcatgac
cttggcaaaggctatacctatggtgaatctgaggaaagaataactttttatggccatgaa
tcaaaaggtgccgagctctggatagcaagggctaaggcccttcgttttaaaaatgagatt
gcggattgggtttttagcctcattaaaaaccacatgagaccgtgccatcttcttaaagag
tgggaaaataagaccttgagtgctcgagctaaaagaaatctccttaaggcccattcggag
ctcttttctctatggatagttgcaatggctgactctctggcatcccggggaccggataaa
gaaaaagattatgaagaaaaacttaaggccttttttaaagacctcttgagttttcaacaa
gacctggaaagggttgaaaaacgggaacgacttataacaggaaaggatctgattgcgata
ggattcaaacccgggccacttttcaaagagattcttgaagaggttgaaataaaagcaatt
gaaggggtattaaaaactaaaaatgaagctatctcctatgtgcttgaaagatacagaaag
gaactaccaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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