KEGG   Thermochaetoides thermophila: CTHT_0035960
Entry
CTHT_0035960      CDS       T03100                                 
Name
(RefSeq) ATP-dependent rRNA helicase rrp3-like protein
  KO
K14777  ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
Organism
cthr  Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cthr03009]
    CTHT_0035960
Enzymes [BR:cthr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CTHT_0035960
Ribosome biogenesis [BR:cthr03009]
 Eukaryotic type
  90S particles
   Helicases
    CTHT_0035960
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Flavi_DEAD CMS1
Other DBs
NCBI-GeneID: 18257634
NCBI-ProteinID: XP_006694025
UniProt: G0S731
Position
Unknown
AA seq 492 aa
MSSKRRKTSHSEGGLKDASAPTLKNDVKSKKTEEKQLSSQPKQPPAPSSEADSETIDNGS
KQGNNDAAPKTFADLGIVESLCEACERLGYKRPTPIQEQAIPLALQNRDLIGIAETGSGK
TAAFALPILQALLDKPQPLFALVLAPTRELAAQIAQAFEALGSMISLRCALILGGLDMVQ
QAIALGKKPHVIVATPGRLLDHLEKTKGFSLRNLKYLVMDEADRLLDMDFGPILEKILKF
LPRERRTFLFSATMSSKVESLQRASLRDPLKVSISTSKYQTVSTLVQHYIFIPHIHKDTY
LIYLVNEFAGKTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRAGS
RNILVATDVAARGLDIPNVDCVLNFDLPQDSKTYVHRVGRTARAGKSGHAISFVTQYDLE
IWLRTEAALGYKLTEYPLEKDEVMVFKPRVEEAQRIAKNEMKKLQEEQDRKKKKKRKAGS
VSARDDMDAEEG
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtcaagcaaacgcaggaaaacctcccattctgaggggggcctcaaggatgcctcggct
ccaaccctcaaaaatgatgtgaaatccaagaaaacggaagagaaacaactttcttctcag
ccaaaacaaccacctgctcccagctcagaggccgactctgagactatcgacaatggttca
aagcaaggaaataatgatgctgctccaaagacattcgccgacctcggcatcgtcgaatct
ctctgtgaggcttgcgagcgcctaggctacaagcggcctacccctatccaggagcaagca
attcctcttgcgctccaaaaccgcgatctcattggcattgccgaaacaggtagtggcaag
accgctgcctttgctcttcccattctgcaagcccttcttgacaagccgcaacccttgttt
gccttagtcctggctcctactcgagagcttgctgcccagatcgcccaagcattcgaagcg
ctgggttccatgatctcgcttcgttgtgctttgatcctgggaggattggacatggtccag
caggccattgccctaggcaagaagcctcatgttattgttgcgactcctggtcgcttactg
gatcatttggagaagaccaagggcttcagtcttcgtaacttgaagtatctggtcatggat
gaagctgatcgccttctcgacatggatttcggccctattctcgaaaagatcctcaagttt
ctaccaagggaaaggagaacctttctgttctccgccaccatgtccagcaaagtcgaaagc
cttcaacgtgccagtttgcgtgacccattgaaggtcagcatctcgacatcgaagtaccag
accgtctcaacccttgtgcagcactacatcttcatcccccatatccacaaggacacttac
ctcatctatctggtcaacgagttcgctggaaagactatcatcatcttcacccgcactgtc
ctcgagacccagcggattgccatcctgcttcgtaccttgggcatgggtgccatcccccta
catggtggcctctcacagtctgcccgccttggcgctctgaataagttccgtgctggctcg
cgcaatatccttgttgctactgatgttgctgctcgcggtctcgatattccaaacgtcgac
tgtgtcctcaacttcgatctgccgcaagattcaaagacttacgttcaccgcgtcggtcgt
acagctcgtgctggcaaatcgggccatgctatcagctttgtgactcaatatgatcttgag
atttggttgcgtaccgaggctgcactcggctacaaactcaccgagtacccgctggagaag
gacgaggtgatggtcttcaagccgcgcgttgaggaggctcaacggattgccaagaacgag
atgaagaagcttcaggaagaacaggacaggaagaaaaagaagaagaggaaggctgggtct
gtatcagctcgtgacgatatggacgccgaggaaggttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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