KEGG   Thermochaetoides thermophila: CTHT_0042590
Entry
CTHT_0042590      CDS       T03100                                 
Name
(RefSeq) putative nuclear pore protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTHT_0042590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cthr03019]
    CTHT_0042590
   03036 Chromosome and associated proteins [BR:cthr03036]
    CTHT_0042590
Messenger RNA biogenesis [BR:cthr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTHT_0042590
Chromosome and associated proteins [BR:cthr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CTHT_0042590
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nucleoporin_FG Nup98_GLEBS DUF6435
Other DBs
NCBI-GeneID: 18258297
NCBI-ProteinID: XP_006694660
UniProt: G0SAK3
Structure
Position
Unknown
AA seq 1793 aa
MSFGFGSGGFGQNNNSSTFGGFGSTPTTNTGFGSTGTTAFGSTSNTTGGGLFGGGGGGFG
SGNTFGSGFGSKPAFGTPATTSSTSLFGSTTTTAGGTGFGSGGFGSTNTSSPFGGGGTSL
FGNKTTTGFGSGTSTFGSNTGGGLFGGGSTTTGFGATNNPGIGTNVGDPPGTAVVPFSPT
VEKEVNNPSQSNSYQNILFMDAYKKWSAEELRLADYNQGRKTAAPGGTGAFGSSGFGGFG
TTSNTGGFGSNTGGGLFGNTQQNTGGFGTTNTTGSAFGSGGGLFGNKPATGGLFGTSSSQ
PAQSGGLFGSGTASTFGSSNTGTTSTFGSNNNTGGGLFGSNNTSSKPAFSFGTSNTSTPG
FGTATTGSGFGTGTTTNTGGGLFGNTAQNTNTGGGLFGNQQQSGSAFGSGTGFGQQNQST
GTSLFGNTQQKPGGLFGSTTTNTSGGLFGSTNTGTSTFGQTPATQNTGGGLFGSKPAGTG
GLFGSTATNQPASTGGLFGNLNTNAQTQQPATGGLFGNLGQNNQAKPSLFGTSTTTGGGL
FGNTNAQQQTGSLFGTSTAQQQPQTGLGASLFGSSQQQQQQPQTFSTSITDISAYGATTL
FSGLPDDKIQNPGPLATPLSGKAKVKSRSILPMYKLSPANASRLVTTPQKRAYGFSFSAY
GSPTSPSSSASSTPGAFGQSILSSSINRGLNKSISASNLRRSLNVEDSILQPGAFSANSS
MRLLGGPGSHKKLVINKDMRTDLFSPPNKDKQPQEDGTAARKTVTKRVSFDTSNVETPEK
TIESSIPATDDSGYLKPDARSTANGTNGANGAKSSPVAAASPPEMEQVKGKELAVVHEEE
SPAPAQTDKPRGSQIEPGAYWMSPTADDIRAMNRMQRQRVVGFTVGRENVGSVQFKVPVD
LSNINLDDLFGTIVILEPRSATVYPNAAKKPPMGKGLNVPALISLEHSWPRGGPTIKGRR
LERHIERLKSIPDTTFESYDPETGVWAFSVEHFTTYGLGDDDDYDDDDYETEPESAVKST
PRPVTSPSISKSSTSPIDPDDTFEFRRSRRALPGAFDDAALSDTDEVANHAQRQGTLSPE
PQDADTPLPSREWPEDESMADGLDEYQLEAYEEASQQGSVDEQEDFLPSRFAADNDAPQV
PAGIMRARMRAVKKLNAPTKIEVAGGDDWTQILQASVKAPRTMDRATLRALNESGAVWEM
KDRGSPPPQATATVSDGMGFATSIDLMKSLFEQAKAPTQPALTTSGKGFVKWPYEQRSKT
DTEENLAVPRTNWGPNELLISTQHNEPNLLPVDAADDSATSPSTLARLQQYINLVSSKKQ
LQRVAGPEFRELAQGDSVWELAALLFDDNGEGVSQFWQQLVSEATDRALSFTAGLEEKAI
ICLAGNRVDEACRHLLAAGNFRLATLVSTIGKVDNKDIRAQLKDWRESNVLAEFSEPIRA
IYELLAGNASVCAGVKNVPIENRVNSFTISQRFGLDWMRSFGLRLWYTSGVIPDVAAAVR
SFQEDIEQDREPEPDSALWTLLKAFASREYDWSDTRLGWLLTKAIYTTGKVSFGEDALQK
LDKASVTFASALTAASHWVPATFVLLQLSDPASREAAVRDHLGRHAHRIGSPRNLMSPFF
TLQKFGVPEAWIWEAKALDYRSRQDSQQEFLALIWAQNYAEANRTFVTRVGPDLVIERNL
PRLFAFAQLLFKVKKHLPNWERSAAVYLLYPMAVMQNQGSGKLDRFDNQLIDGLVALHSQ
THGDIRQEAAIADMAEELIKCKGAAAASDPRLLQLLPQDVRGKYLRAQVLEAF
NT seq 5382 nt   +upstreamnt  +downstreamnt
atgtcattcggtttcggcagtggcggcttcggccagaacaacaattcatcgacttttggt
ggctttggctcgactccgaccacgaacacagggtttggttcgaccggcaccacggcattt
ggctcgacctccaataccaccggcggcggtctgtttggcggtggtggcggcggcttcggc
tccggcaacacctttggcagcggctttggcagcaaaccggcctttggcacacccgccacg
accagctccaccagtcttttcggctccacgaccaccactgctggcggtaccggcttcggc
agcggtggctttggcagcacaaataccagctctccattcggtggtggcggtacgtcactc
tttggcaacaagactaccaccggcttcgggtctggcacatcgacttttggaagcaacact
ggcggcggcctctttggcggcggctcaaccaccaccggtttcggtgccactaacaatcca
ggcattgggaccaatgtcggcgatccccctggcacagccgttgttcccttctctcctact
gtcgagaaggaggtgaataatccctctcagagcaattcgtaccagaacatccttttcatg
gatgcctacaagaaatggtctgccgaagaattgagattggcggattacaaccagggtcgc
aagactgctgcccctggcggaactggtgcctttggcagttccggttttggcggctttggc
acaacttccaacactggcggtttcggttccaatactggcggtggcctgttcggtaacacc
cagcagaatactggaggctttggcacgaccaataccactggtagcgcctttgggtctggc
ggcggcctcttcggcaacaagcctgccactggcggccttttcggtacttcatcctcacag
cccgctcagagcggtgggttgttcggtagtggcaccgctagcactttcggttccagcaac
actggcaccacgagcaccttcggctctaacaacaacaccggcggcggcctgtttggaagc
aacaacacttcctcgaagccagcctttagctttggcacttctaacaccagcactccgggc
ttcggcaccgcaacgaccggttctggttttggcacaggcactaccacaaacaccggtggc
ggcctctttggtaacacggctcagaacactaacactggtggtggtctcttcggcaaccaa
cagcaatctggctctgcgtttggcagcggcaccggctttggccaacaaaatcagtctact
ggcacatcgctgttcggcaacactcagcaaaagcccggtggtttgttcggctctaccacg
accaatactagtggtggccttttcggaagcaccaacacgggcacttctacctttggccag
actcccgccactcagaacacgggcggcggtctgtttggttccaagcctgccggcaccggt
ggcttgttcggttctaccgccactaaccaacctgcttctactggcggtctctttggaaac
ctcaacactaatgctcaaacccaacagcctgcgacgggtgggctgtttggcaatctgggc
cagaacaaccaagccaaaccctctctgtttggtacctcgacaaccactggcggcggtctc
ttcggtaacacgaacgctcagcaacagaccggaagtctattcggaacctctactgcccaa
cagcagccgcaaacgggcttgggcgcttcgctctttgggtcttctcaacagcaacagcag
cagccgcagactttctcgactagtatcaccgacatatctgcgtacggtgccacaacactg
ttttcgggccttcccgatgacaagatccagaatcccggtcccctcgcgacgcctctgtct
ggcaaggccaaggttaagagccggtcaatcttgcccatgtacaagctcagcccggccaac
gcatcccgccttgtcactaccccacaaaagcgcgcttatggcttctcattcagtgcctac
ggatcgcccacaagcccgtcctccagcgcgtcgagcactcccggtgccttcggccagagc
atcctttctagcagtatcaatcgcggcctgaacaagagcatctcggctagcaaccttcgt
cgctccctcaacgtcgaggatagcatcctccagcccggtgcgttctctgctaactcgagc
atgcgcctgcttggcggccctggcagccacaagaagctggtcatcaacaaagacatgcgt
accgatttgttcagtcctccgaataaggacaagcagcctcaagaggatggcactgccgct
cgcaagaccgtgaccaagcgcgtcagcttcgacacaagcaatgttgagactcccgagaag
acaattgaaagcagcatccctgccactgatgattccggctatctgaagcctgatgcccgt
tctaccgccaacggcactaacggcgcgaatggcgccaagtcgtctcccgttgctgctgcc
tccccccccgagatggagcaggttaagggcaaggaactcgctgtcgtccacgaagaggag
tcccctgctcctgctcagaccgacaagccgcgcggttcccagattgagcctggcgcctac
tggatgtcgcccactgctgacgatatccgcgccatgaacaggatgcagcgccagcgcgtt
gttggctttactgttggccgtgagaatgtgggcagtgtccagttcaaggttcccgtggat
ctgagcaacatcaatcttgatgatctctttggtactatcgtcattttagagccgcgctcc
gccactgtttacccgaacgcggccaagaaacctcctatgggcaagggtctgaacgtgcct
gctcttatttccctggagcactcatggccccgcggcggtcctacaatcaagggccgtcgc
cttgagcgccacattgagcgcctgaagtccattcccgatacgacgtttgagagctacgac
cctgagactggtgtctgggctttctcggttgagcatttcacgacctatggtttaggtgac
gacgatgactacgatgatgatgactacgagacagagcccgagtctgccgttaagtcgact
ccgcgcccggtgacgagcccgtcgatctctaagagctcgacctcccctatcgaccccgat
gacacgttcgaattcaggcgcagccgccgcgcccttcccggcgccttcgatgatgctgct
ttgtctgacactgacgaggttgctaaccacgctcaacgccagggtacgctgtctccggag
ccgcaggacgctgatacccccttgccatcgcgggaatggcccgaagatgaaagcatggct
gacggtctcgatgaataccagctcgaagcctatgaagaggcgtctcagcagggatccgtc
gacgagcaggaggattttttaccctcgcgtttcgccgccgacaatgacgccccccaggtc
cctgctggaatcatgagggcacgcatgcgcgcggttaagaaattaaatgcgcccacgaaa
atcgaagtagccggtggtgatgattggactcagattttgcaagcgagcgttaaggctccc
cgtacgatggatcgggcaacattgcgggctctgaacgagtctggtgcagtgtgggaaatg
aaggatcgtggcagtcctcctcctcaggcgactgcaactgtctccgacggaatgggcttt
gccaccagcatcgatttgatgaagtcgctgtttgagcaagcgaaggccccgactcagcca
gcgttgacgacttccggcaaagggtttgtgaagtggccttatgagcaacgttctaagact
gataccgaggaaaatttggcagttccccgaaccaactggggccctaacgaacttttgatt
tcaacccagcacaacgaaccgaatctgttgcccgttgatgctgccgacgactctgccaca
tctcccagcactcttgctcgtcttcagcagtacatcaaccttgtttcgagcaagaagcaa
ctccagcgggtagctggcccagagtttcgtgaactggcacaaggtgattccgtttgggag
ctcgccgcactactcttcgatgacaacggtgaaggtgtttctcagttctggcagcagctt
gtctctgaggctactgaccgcgccctttctttcaccgccggtctcgaggagaaggccatc
atttgcttggctggcaaccgtgtggacgaagcttgccgccacttgcttgctgccggcaat
ttccgacttgctactctcgtgtcgaccatcggcaaggttgataataaggacatccgcgcc
cagttaaaggattggcgggagtcaaacgtgctggctgagttctccgagcccattcgggct
atctatgagctcctggctggcaatgcgtctgtttgtgctggggtcaagaacgttccaatc
gagaatcgcgtcaattctttcaccatttctcagcgtttcggattggattggatgcggtca
ttcggtctgcgcctgtggtatactagcggtgtgattcctgatgttgctgcagcagtccgt
tccttccaggaggatatcgagcaggatcgcgagccagagcctgacagcgcgctgtggaca
cttctcaaggccttcgctagccgcgagtacgactggtcggatacacgcctcggatggctc
ctcactaaggccatctatacgacgggaaaggtctcgtttggtgaggatgctttgcagaag
ctcgataaggcatcagtcacctttgcctcggcgctgacggcggcatcccactgggtcccg
gccacctttgttctcctccagctttccgaccccgcttcgcgcgaggccgcagtccgtgac
cacctcggccgccatgcccaccgcatcggctctcctcgcaacctcatgagtcccttcttt
actctccagaagtttggcgtgccggaggcttggatatgggaagccaaggccctggactac
cgctcccgtcaggactcccaacaggagttccttgccctcatctgggcacagaactacgcc
gaagcgaaccggacatttgtcacgcgcgttggtcccgacctggtcatcgagcgcaacctc
ccgcgcctgtttgccttcgcccagctgctcttcaaggtcaagaagcacctgcctaactgg
gagcgtagcgctgctgtatacctcctttacccgatggccgtgatgcaaaatcagggctct
gggaagttggatcgctttgacaaccagctcatcgatggtctggtggcgcttcacagccaa
acccacggcgacatccgccaggaggcggccatcgcagatatggcggaggaattgatcaag
tgcaagggcgccgctgctgcttcagatccacggttgcttcagctgctgccgcaagatgtt
cggggcaagtatctgcgtgctcaggtgctggaggcgttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (6)   
   PDB (6)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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