KEGG   Thermochaetoides thermophila: CTHT_0065530
Entry
CTHT_0065530      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CTHT_0065530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cthr03009]
    CTHT_0065530
Ribosome biogenesis [BR:cthr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    CTHT_0065530
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 Ge1_WD40 DUF5789
Other DBs
NCBI-GeneID: 18260591
NCBI-ProteinID: XP_006696852
UniProt: G0SG95
Structure
Position
Unknown
AA seq 912 aa
MATKQPAKTTFEVANVIQPIYTGGSVALENGARILASTLGENAILTELNTGKRLAEIQGD
GEPISTLTITPSGSHLIVCSRSLTMRIYSLAISPDYDSVEPTLVRTTKPHATPVVVLAVD
RTSTLLATGAADGAIKIWDIIGGYVTHTVSGPSVLVSALHFFEIAVTAESQSSNKKPKKG
SRKGQNDDADEIASRFRLAWGTQDGRIRIFDLYKRTTTPVYADPKRKKEAHESNVQCIAY
SPEQHALLSGSRDKTMTLWLWRDGIWQGTPMLRHELLESVGFLNEGKWMYSAGTSGVLRI
WDTTTHHEITKKQDAKSEGEAILSAVSLPERSLILCAQADFTLVLYRVPSPADVVSSSEG
ILLEPFRRISGTHDEILDLTYILPDQSMMAIATNSEDIRIVSVKDAQAYSEDNAECRSGS
YFGHDVALLKGHEDIVMSLDVDWSGHWIASGSKDNTARLWRVDPANNSYTCYAVFTGHLE
SVGAVALPKVVPPANSEAFKNPLDHPPAFLISGSQDRFVQKRDIPRQLQKGGKLTSSLRR
LAHDKDINALDISPNGKLFASASQDKTVKIWDVEKLEVQGILRGHKRGVWTVRFAPLNTP
VIQGEQGSVSGRGVVLTGSGDKTIKLWNLSDYTCIRTFEGHSHNVLKVVWLHISRDDSIT
KTKVQFASAGADTLVKVWDANTGETECTLDNHEDRLWTLAVHSKTNILASAGSDSKVTFW
RDTTAETQAAAAQAALKLVEQEQTLENYIHAGAYRDAIVLALQLNHPGRLLNLFTNVVTT
RNPDPDSLTGLKAVDDVLAKLSDEQIFQLLLRLRDWNTNARTAPVAQRVLWALFKSHPAN
KLSSLSVKGARGHKSLNEVLDAIKVYTERHYKRIEELVDESYLVEYTLREMDALTPQTEA
LEAGEDAVIAEA
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggcgacgaaacagcctgcaaagacgacctttgaggtcgcaaatgtcatccagccgatc
tacacaggtggatctgtcgctcttgaaaacggcgctcgcatcctcgcgtccacactcggc
gagaatgccatcctcactgagttgaatacgggcaagcgcctggccgaaattcagggagat
ggcgagccaatttcaaccctgaccatcaccccgtctgggtctcatctcatcgtctgttct
cgatcattaacaatgcgcatctactcgcttgccatttctccagattacgattccgtcgag
ccgacgcttgtcaggacaacaaaaccccatgctaccccagtcgtagttcttgctgtcgac
cggaccagcactctgcttgccactggtgcagctgacggagccatcaagatttgggacatc
atcgggggatatgtcacgcacactgtcagtgggccgagcgtgcttgtctcagcgctgcat
ttcttcgagattgccgtaaccgctgagagtcaatcatccaataagaagccaaagaagggc
tcgcgaaagggccagaacgatgacgccgacgagattgcatcccgtttccggctagcctgg
ggcacacaggacggccggattcgcatattcgatctttacaagcgcacgacgaccccggtg
tatgccgacccgaagaggaaaaaggaggcgcacgagtccaacgtgcaatgcatcgcctac
tctccagagcaacacgccctattgagcggcagcagagacaagaccatgaccttgtggctg
tggcgggatggcatctggcaaggcacaccaatgttgcgccacgaactgttggagtcggtc
ggctttctcaacgaaggcaaatggatgtattcagctggtaccagtggtgtgctgcgcatc
tgggacacaacaacgcaccacgaaattaccaagaagcaagatgcaaagtcggagggcgag
gctatcctttccgctgtttccctgcccgagaggtccctgatactttgcgcacaggcggac
tttactctcgtcctgtaccgtgtgccatcgccggcagacgtcgtctcgtcatcagaaggg
atactcctggagccattccgccgtatttccggtacacacgatgaaattcttgatctgact
tacatcttgcccgatcagtccatgatggcaatcgctacgaactctgaagacatcaggatt
gtatctgtcaaggatgcccaggcttactcagaagacaacgcagagtgccgttccggctct
tactttgggcacgatgtagcgttactaaaggggcatgaagatattgttatgtccttggac
gtcgactggtccgggcactggattgctagtggctctaaggacaacacggcacggttatgg
cgtgtcgaccccgcgaataactcctacacatgctatgctgttttcactggtcaccttgag
tccgtgggagctgttgcgcttcctaaggttgtcccgccagcgaattcagaggcattcaaa
aaccccctcgatcacccacctgcgttccttatctctggttcgcaggatcgtttcgtccag
aaaagagacatcccgcggcaattacagaaaggcggaaagctgacgtcgagtcttcgacgt
ctggctcatgataaagacatcaatgcacttgacatcagccccaatgggaagctctttgct
tcagcatctcaagacaagacggtgaagatttgggatgtggaaaaactagaagtgcagggt
atcctcaggggtcacaagagaggtgtttggactgtcaggttcgcgccactaaacacaccg
gtgattcaaggcgagcaaggttcagtttcgggaaggggcgtcgttctaactggtagcggt
gacaagacgataaagctctggaacctgtccgattacacctgcatccggacattcgaaggc
cactcgcataatgtcctcaaggttgtgtggttgcacatttcccgtgacgactcaattacc
aagacaaaggtgcaatttgccagcgctggcgctgacacgctcgtcaaggtgtgggatgcc
aacactggtgagactgagtgcacacttgacaaccatgaggatcggctatggacgctggcg
gtgcattccaagaccaatatactggcctctgccggcagcgattccaaggtgactttctgg
agagacaccaccgctgagacacaagctgcggctgcccaggcagcgcttaagttagtcgaa
caggagcagacattggagaactacatccatgcgggtgcctaccgcgacgccatcgttctt
gctctgcaacttaaccaccccggccggctgctcaaccttttcaccaacgtcgtcacaacc
cgcaatcctgacccagacagtttgactggcctcaaggcggtcgatgacgtgcttgctaag
ctctcagacgagcagatcttccagctcctgctgcgcctgcgtgactggaacaccaacgcg
cgcactgcacccgtcgcacagcgcgttctctgggcattattcaaaagccacccggccaat
aagttgtccagtctgtctgtcaaaggtgctcggggacacaaaagcttgaacgaggtgcta
gacgccatcaaggtttatacggagaggcactacaagcggattgaagaactggtggacgaa
agttatctggtggaatatacgttgcgtgagatggatgctctcacgccgcaaactgaggca
ctggaggctggtgaggacgctgtaatagcagaagcgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (9)   
   PDB (9)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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