KEGG   Thermochaetoides thermophila: CTHT_0073630
Entry
CTHT_0073630      CDS       T03100                                 
Name
(RefSeq) hypothetical protein
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cthr  Thermochaetoides thermophila
Pathway
cthr03440  Homologous recombination
cthr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cthr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CTHT_0073630
   03450 Non-homologous end-joining
    CTHT_0073630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cthr03032]
    CTHT_0073630
   03400 DNA repair and recombination proteins [BR:cthr03400]
    CTHT_0073630
DNA replication proteins [BR:cthr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    CTHT_0073630
DNA repair and recombination proteins [BR:cthr03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     CTHT_0073630
    BRCA1-C complex
     CTHT_0073630
   NHEJ (non-homologous end-joining)
    MRX complex
     CTHT_0073630
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_21 AAA_15 AAA_29 AAA_16 ABC_tran AAA_13
Other DBs
NCBI-GeneID: 18261401
NCBI-ProteinID: XP_006697619
UniProt: G0SHW7
Structure
Position
Unknown
AA seq 1315 aa
MSKIEKLSILGVRSFGPHHPETIAFNTPLTLIVGYNGSGKTTVIECLKYATTGELPPNST
RNGAFIHDPDLVGEKEVRAQVKLSFRSTIGESYVVTRNIQLLVQRNNKRTQKTLEGSLLL
RNNGERTVISTRVAELDKLVSEKLGVPPAILDAVIFCHQDDSLWPMSEPAALKKRFDEIF
EAQKYTKVIENIRLLKKKKGDELKILKEREVQDKANKERAEKVDRLMAQLTREILEAREK
CNELSKQMEEESAKIKDKYEQANSFLKIMNDLQTKTEKLEYKKDAIVELRSRIEELPDPD
EVLRNTLDEYEQTINRIVADRDHKAAQFHDLQAELKSARDQHTAKAAEQGKHQSDKEKYE
RQLVARERMIREAAERHEIRGYNGDLDDRRIAIFNERIQKILNDKRRELERLQRENQEEL
DRKTAVIAERESRKQSVIRDRKAAKDRIISLGKDMASIQGELSSIDIDEGTEEMLRAEMK
ELQARIEAAKADEQNANLDAQIKEVNEEIWKLESLSAKLARELVECTRLASERAQLDLRR
KQLAERKRELEIMTNTWNEQFSTLLGEGWRPETLERDFSDVLKQQQLLVGEHRKKKDATQ
QELKQAEYQLSNARNLHNKLTNEMEACMRAVQTAMKEARDLDSAPPVDEYITMLETDEKE
LAEVETALKLYDELKKHYSTIKDRALRFNKCYICDRDFTNQEAAKTRLLEKVAKRLGDEE
KKELLEDQAAFMKSLDILRAVRVKYDTYQRLSSELPQLSREIDSETNRREDLVRRLEDQD
LAFREADNKLQEMETLNKHVMKITQLLKDISDAEKQVERSQQLSNIETRSADEINEEQTT
CAEQTRAAQAKLTKLTAEKQRLKDLVRQLEVERLQLENKISSAVQQLERKKRLQESIARH
KEDQNQARNAVQEADEELERLEPEIAGARAALDEARQACRAKEQKVAAERDAIAQTVSEL
NMINSEIQEYLDRGGPSSLAANQRAIANLETQMANLEGEMRELTVQINKLNKEIDNSDAK
KRNIADNLTYRKNLREKDALEREIAELEARNAQEDYDRLIKEAHYLEAHRSKLNADRERL
MGMMSTKDEEFRRLNEEYELDLKDAKAKYKETHIKVETTKAAIEDLGRGMAAVDHAIMQY
HSKMMEQINRTIAELWQSTYQGTDIDTIQIRSDVESTTSSDSGTRRNYNYRVSMVKGDTE
MDMRGRCSAGQKVLASIIIRLALAESFCANCGLIALDEPTTNLDSDNIRSLAESLHGIIK
ARQAQGNLQLIVITHDEEFLKYMQCSDFCDDFYRVKRDEKQNSVIVRESITRITE
NT seq 3948 nt   +upstreamnt  +downstreamnt
atgtccaaaatcgagaaactctccatcctgggagtgcgctccttcgggccgcaccaccct
gagaccatcgcgttcaacactccactcaccctgattgttggttataacggctctggtaaa
acgactgtcattgaatgcctgaaatatgccactaccggcgagctgcccccaaacagcacc
agaaatggcgcattcattcacgatccggacttggtcggcgagaaggaggtgcgcgcccag
gtgaagctctcgttccgctcaacgatcggcgagtcctacgtcgtcacccgcaacatccag
ctgttggtgcagcgcaacaacaagagaactcaaaagactttggagggcagtctgctgctt
cgaaataatggagagcgtaccgttatctctacccgtgtggccgagctggacaagctggtc
tcggagaagctaggagtccctcctgctatcctcgatgccgtcattttctgccatcaggac
gactcattgtggcccatgagcgagccggctgcgctgaagaagagattcgatgagatcttt
gaggcccagaaatacaccaaggtcattgagaatatccgtttgctcaagaagaagaagggc
gacgaactcaagattctcaaggagcgcgaggtgcaagataaggcgaacaaggagagggcc
gagaaggtcgatcgcctgatggcccagctgactcgggaaatcctggaagcgcgcgagaag
tgtaacgagctctcgaagcagatggaggaggagtcagccaaaatcaaggacaagtacgag
caggcgaacagcttcctcaagatcatgaacgacctgcaaaccaagaccgagaagctcgag
tacaagaaggatgccatcgtggaactacgcagccgcatcgaagagctccccgatcctgac
gaggtcctgcgcaataccctcgacgagtatgagcagaccatcaaccggatcgtggctgat
cgcgaccacaaggctgcccagttccatgacctgcaggccgagctcaagtcggcacgggat
cagcacactgccaaggccgctgagcagggcaagcaccagtcggacaaggagaagtacgag
cggcagttggtcgcgcgcgagcgcatgatccgtgaagcggctgagcgccatgagatccgc
ggctacaatggcgatctggacgatcgaaggattgctatcttcaacgagcgcattcagaag
atcttgaatgataaaaggcgtgagttagagcgcctgcagcgggagaaccaggaggagttg
gataggaagaccgcggtgatcgcggagcgtgagagccgcaagcagtcagttatccgggat
cgcaaggctgcgaaagatcgcatcatctctcttgggaaggatatggctagcatccaggga
gagttatccagcatagatattgacgaaggcacggaggagatgcttcgcgctgagatgaag
gagctgcaggcacggattgaggcagctaaggctgatgagcaaaatgccaacctagacgca
cagatcaaggaggtcaacgaggagatttggaagttggagtcgctctcggccaagctagct
cgggagttggttgagtgcaccaggttagcgtcggaaagggctcagctggatttgcgcagg
aagcaactagcagagcgtaagagggagctggagatcatgacaaacacgtggaatgagcag
ttttcgactttgctgggagagggctggcgtccagagacccttgagcgcgacttcagtgat
gttcttaagcaacagcagctgctcgtgggtgagcaccggaagaagaaagatgccacacaa
caggaactcaagcaggctgagtaccagctctcgaatgccaggaatctccacaacaagctt
accaacgagatggaggcctgcatgagagctgtccagacggcgatgaaggaagcaagagac
cttgactctgcaccacctgtcgatgagtacatcactatgctggaaaccgacgaaaaagag
ctggctgaggttgagacagcgctcaagttgtacgatgagttaaagaagcactattcgact
atcaaagatagggctctgcgcttcaacaagtgctacatttgcgaccgggacttcaccaac
caagaagcggccaagactaggttgttggagaaggtggccaagcggctcggggatgaagag
aagaaagagttgcttgaagaccaagcagccttcatgaaatctctggatattcttagggca
gtccgtgtcaaatatgatacgtaccagcgcctgagcagcgaactcccacagctgagccgg
gaaatcgactcagagacaaatagacgggaggaccttgtccgccgtttagaggatcaggac
ctggccttccgcgaggccgataacaagctgcaggagatggagacgcttaacaagcatgtc
atgaagattacgcagctgctcaaggatatcagtgatgcggagaagcaggtcgagaggtcg
cagcagttgtcgaatatcgagacgcgcagtgccgacgagatcaacgaggaacagacaaca
tgcgctgagcaaactcgagcggcccaggcgaagctcaccaagctgacagctgagaagcag
cgcctaaaggacctggtccgccagctcgaggtcgagcgcttgcagttggaaaacaagatc
agcagtgccgtccagcagctcgagcggaagaagcggctgcaggagtccatcgcccggcac
aaggaggaccagaaccaagcacgtaacgccgtgcaggaggccgacgaggagctggagcgt
ctggagcctgagattgccggtgcccgggctgcactcgacgaagctcgtcaggcctgccgg
gctaaggagcagaaggtcgctgcagagcgcgatgccatcgcgcaaacggtcagcgagctc
aacatgatcaacagcgagattcaagagtatctcgaccggggcgggccctcaagcctcgca
gccaaccagcgggccattgccaatttggagacccagatggccaacctggagggcgaaatg
cgcgagctgacggtgcagatcaacaagctcaacaaggagatcgacaacagcgacgccaag
aaacgcaacattgccgacaatctgacataccgcaagaacctgcgggaaaaagatgcgctg
gagcgtgagattgccgagcttgaggcacgcaacgcccaggaggattatgaccggctgatc
aaggaggctcactacctcgaagcccaccgcagcaagctcaacgcggaccgcgagcgcctt
atgggcatgatgtcgaccaaagacgaggagttccgccgcctaaatgaagaatacgaactc
gacctgaaggacgccaaagccaagtacaaagaaacgcacatcaaagttgagacaaccaaa
gcagccattgaggacctcggccgcggcatggctgccgtcgaccacgccatcatgcagtac
cacagcaagatgatggagcagatcaaccggacgattgctgagctctggcagagcacatac
cagggcaccgatatcgataccatccagatccggtcagacgtggagagcacgacctcctca
gacagcgggacaagaaggaactataactaccgcgtgtcgatggtcaagggcgatacggaa
atggacatgcgtgggcgatgctcagccggtcagaaagtcctcgccagtatcatcatccgg
cttgcgctggcggagtccttttgcgcgaactgtggtctcatcgcgcttgacgagccgacg
actaacctggatagcgataacatccggagtctggcggagtccttgcacggaattattaag
gcacgccaggcgcaggggaatctgcagctgattgtgattacgcacgacgaggagttcctg
aagtacatgcagtgtagcgatttctgtgacgatttctatcgggtgaagagagatgaaaag
cagaacagtgttattgttagggagagcattacgaggattacggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (4)   
   PDB (4)   
Protein domain (9)   
   Pfam (9)   
All databases (26)   

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