KEGG   Chlamydia trachomatis G/11222: G11222_02330
Entry
G11222_02330      CDS       T01905                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ctq  Chlamydia trachomatis G/11222
Pathway
ctq03410  Base excision repair
ctq03430  Mismatch repair
ctq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    G11222_02330
   03430 Mismatch repair
    G11222_02330
   03440 Homologous recombination
    G11222_02330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctq03400]
    G11222_02330
DNA repair and recombination proteins [BR:ctq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     G11222_02330
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     G11222_02330
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      G11222_02330
SSDB
Motif
Pfam: RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: ADH19070
Position
complement(517532..519286)
AA seq 584 aa
MEKDSLSSLGQKWDYPKHNEVFLKKILKEFHLHPAIAQVLISRGFQSIQEIRDFLYPQLS
SLHSTSLFLDMEKAVARLLQAKANNEHVMIYGDGDVDGITGVTLIVEFLQILGVKTSYCC
SGTLFKQHGETASLISQMLQDGISLLITVDCGITAGKEVHAINKQGIDVIVTDHHMPTGK
LPHCVAMLNPKLDKNPYPNKELTGVGVAFKLVCATYEELIQQDASWKDKIDLLRFLDLVS
LGTIADVGRLSGENRILVSYGIKEIAKGKRLGLKKLCSLSGVDKSEVSSTNLGIRITPKL
NSLGRLADSSQGVKLLLSHDPKNIGTIVSELSAVNQERQRIEAEVLRDVERILAANPKLT
AQSAIVLASPNWHSRVIPIISARLARTYNKPVAIIALQDGIGKGSLRTIGSFPLLGVLRK
CESFFLSYGGHDFAAGLMIKEDQVEGFRKKFIHLVSSSLRKDDAMRTLSLDVGMDFSRIN
RDLIASMELLEPFGKGNVSPVFYTKAIQVRYPKLLAGNHVKLYLNSGERNLEGTAFGQGD
KISLLKANWNIPLDIAYTLRIMRRSARGAIRLLIQDFRIQIPRL
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggaaaaagatagtttatcctcccttggacaaaaatgggattaccctaagcataatgag
gtctttctaaagaagatcttaaaagagtttcatcttcatcctgcgattgctcaagtgctc
atatctcggggatttcagtctatccaagagattcgagattttctgtatccccagctctcc
tcattgcactccacctctttgttcttagatatggagaaagctgtagcacggttactccaa
gctaaagcaaataatgagcacgtgatgatctatggagatggggatgtagacggtataaca
ggcgtgaccttgatcgttgaatttctacaaatacttggagtgaaaacaagttattgctgt
tccgggacattgtttaaacaacatggagagacagcttctttaatttctcaaatgctgcag
gatggtatttctcttttaattactgtggattgcggtatcacagcagggaaagaggttcac
gctatcaataaacagggtatagacgtgatcgttacggatcaccatatgcctacagggaag
cttccgcattgcgttgcaatgctaaatcctaaattagataaaaatccttatccaaataaa
gagcttacaggagtaggagtcgcgtttaaattggtatgcgcaacctatgaagaattgatc
cagcaggatgcttcttggaaagacaaaatagaccttttgcgttttttagatttggtaagt
ttggggacgattgcagatgtagggaggctttcaggagagaatcgtatcttagtttcttat
ggaattaaagaaatagcaaaaggaaaacgattaggcttaaaaaagctgtgttcattatca
ggggttgataagtctgaggtatcgtcgaccaatctaggaattagaattactccaaaactc
aatagtttagggaggttggcagattcaagtcagggtgtaaagttacttttgtctcatgat
cctaaaaatattggaacgatcgtctcagagctttctgctgtaaatcaagagcgtcagcga
atagaagccgaggtactgcgcgatgtggaaaggattctagctgcgaatcctaagcttaca
gctcaatcagctattgtattagcttctcctaattggcactctagagtaatccccattatt
tctgctcgtttagcgcgtacctataacaagccagtagcaattattgctctccaagatggg
ataggaaagggatctttacgtactataggatctttccctttattaggagttcttcgtaaa
tgcgaatccttttttctatcgtatggcgggcatgatttcgctgccgggcttatgatcaaa
gaagatcaggtcgagggattcaggaaaaaatttattcatctagtgagttcttctttgaga
aaagatgatgcaatgcgtacgctttccttagatgttgggatggatttctctcgcatcaat
cgggatttaattgcttctatggagcttcttgagccttttggaaaagggaatgtatcccca
gtcttctatacaaaagccatacaggtgcgttatccaaagttattagccgggaaccatgtc
aaattgtatttgaatagtggggagagaaacttggaggggacggctttcggtcagggggat
aagattagtctactcaaagcgaattggaatatacctttggatatcgcctatacgttacgt
attatgaggcggtcggctcgcggagcaattcgtttgttgattcaggattttcgtatacag
attcctcggttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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