KEGG   Chlamydia trachomatis F/SotonF3: SOTONF3_00270
Entry
SOTONF3_00270     CDS       T02552                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ctrf  Chlamydia trachomatis F/SotonF3
Pathway
ctrf03030  DNA replication
ctrf03430  Mismatch repair
ctrf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SOTONF3_00270
   03430 Mismatch repair
    SOTONF3_00270
   03440 Homologous recombination
    SOTONF3_00270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ctrf03032]
    SOTONF3_00270
   03400 DNA repair and recombination proteins [BR:ctrf03400]
    SOTONF3_00270
Enzymes [BR:ctrf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SOTONF3_00270
DNA replication proteins [BR:ctrf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SOTONF3_00270
DNA repair and recombination proteins [BR:ctrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SOTONF3_00270
SSDB
Motif
Pfam: RNase_T QSregVF_b RNase_H_2 Rv2179c-like ExoX-like_C DNA_pol_B_exo2 DUF1340
Other DBs
NCBI-ProteinID: CCP56932
Position
293064..293762
AA seq 232 aa
MPALIFYDTETTGTQIDKDRIVELAAYNGTTSESFQTLVNPEIPIPAEATKIHGITTAEV
ADAPRFPEAYQKFIEFCGTDNILVAHNNNAFDYPLLVRECRRHGLSEPQLRTIDSLKWAK
KYRTDLPQHSLQYLRQVYGFEENQAHRALDDVITLYRVFSALVGDLSPDQIYDLLNETCH
PRIFKMPFGKYKGKPLSEVPSSYIAWLQKGDYLLQPENKEIKAAIEAYQQLK
NT seq 699 nt   +upstreamnt  +downstreamnt
gtgccagctttaattttttatgatacagaaacgacaggtacgcagatagataaggatcgt
atagtggagctagctgcttacaacgggactacgagcgagtctttccaaacgctagtaaac
cctgaaatccctatacctgctgaggcaactaaaattcatggtattacgactgcggaagtg
gccgacgcccccagattcccagaagcttatcagaaatttatcgaattttgtggtacagat
aatattcttgtagctcacaataacaatgctttcgattatcctctgttagttcgtgaatgt
cgtagacacggcttatctgagcctcagcttcgtactatagattcgttaaaatgggcaaaa
aaatatcgaaccgacttgcctcagcatagtctccaataccttcgtcaggtatacggattc
gaagaaaatcaagcgcaccgagcattagatgacgtaatcactctttatagagtattttca
gctttagtgggagatttgtctcctgatcaaatttatgatctactaaatgagacttgtcat
cctcgcatatttaaaatgcctttcggtaagtataaagggaaacctctttctgaagtcccc
tctagttacatcgcctggttacaaaaaggtgattacttgctacaaccagaaaataaagaa
attaaagcagccattgaggcctatcagcaattgaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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