KEGG   Chlamydia trachomatis F/SotonF3: SOTONF3_00472
Entry
SOTONF3_00472     CDS       T02552                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ctrf  Chlamydia trachomatis F/SotonF3
Pathway
ctrf03410  Base excision repair
ctrf03430  Mismatch repair
ctrf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ctrf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SOTONF3_00472
   03430 Mismatch repair
    SOTONF3_00472
   03440 Homologous recombination
    SOTONF3_00472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctrf03400]
    SOTONF3_00472
DNA repair and recombination proteins [BR:ctrf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SOTONF3_00472
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SOTONF3_00472
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SOTONF3_00472
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1
Other DBs
NCBI-ProteinID: CCP57128
Position
complement(518182..519936)
AA seq 584 aa
MEKDSLSSLGQKWDYPKHNEVFLKKISKEFHLHPAIAQVLISRGFQSIQEIRDFLHPQLS
SLHSTSLFLDMEKAVVRLLQAKANNEHVMIYGDGDVDGITGVTLIVEFLQILGVKTSYCC
SGTLFKQHGETASLISQMLQDGISLLITVDCGITAGKEVQAINKQGIDVIVTDHHMPTGK
LPHCIAMLNPKLDKNPYPNKELTGVGVAFKLVCATYEELIQQDASWKDKIDLLRFLDLVS
LGTIADVGRLSGENRILVSYGIKEIAKGKRLGLKKLCSLSGVDKSEVSSTNLGIRITPKL
NSLGRLADSSQGVKLLLSQDPKNIGTIVSELSVVNQERQRIEAEVLRDVERILAANPKLT
AQSAIVLASPNWHSRVIPIISARLARTYNKPVAIIALQDGIGKGSLRTIGSFPLLGVLRK
CESFFLSYGGHDFAAGLMIKEDQVEGFRKKFIHLVSSSLRKDDAMRTLSLDVGMDFSRIN
RDLIASMELLEPFGKGNVSPVFYTKAIQVRYPKLLAGNHVKLYLNSGERNLEGTAFGQGD
KISLLKANWNIPLDIAYTLRIMRRSARGAIRLLIQDFRIQIPRL
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggaaaaagatagtttatcctcccttggacaaaaatgggattaccctaagcataatgag
gtctttctaaagaagatctcaaaagagtttcatcttcatcccgcgattgctcaagtgctc
atatctcggggatttcagtctatccaagagattcgagattttctgcatccccagctctcc
tcattgcactccacctctttgttcttagatatggagaaagctgtagtacggttactccaa
gctaaagcaaataatgagcacgtgatgatctatggagatggggatgtagacggtataaca
ggcgtgaccttgatcgttgaatttctacaaatacttggagtgaaaacaagttattgctgt
tccgggacattgtttaaacaacatggagagacagcttctttaatttctcaaatgctgcag
gatggtatttctcttttaattactgtggattgcggtatcacagcagggaaagaggttcag
gctatcaataaacagggtatagacgtgatcgttacggatcaccatatgcctacagggaag
cttccgcattgcattgcaatgctaaatcctaaattagataaaaatccttatccaaataaa
gagcttacaggagtaggagtcgcgtttaaattggtatgcgcaacctatgaagaattgatc
cagcaggatgcttcttggaaagacaaaatagaccttttgcgttttttagatttggtaagt
ttggggacgattgcagatgtagggaggctttcaggagagaatcgtatcttagtttcttat
ggaattaaagaaatagcaaaaggaaaacgattaggcttaaaaaagctgtgttcattatca
ggggttgataagtctgaggtatcgtcgaccaatctaggaattagaattactccaaaactc
aatagtttagggaggttggcagattcaagtcagggtgtaaagttacttttgtctcaagat
cctaaaaatattggaacgatcgtctcagagctttctgttgtaaatcaagagcgtcagcga
atagaagccgaggtactgcgcgatgtggaaaggattctagctgcgaatcctaagcttaca
gctcaatcagctattgtattagcttctcctaattggcactctagagtaatccccattatt
tctgctcgtttagcgcgtacctataacaagccagtagcaattattgctctccaagatggg
ataggaaagggatctttacgtactataggatctttccctttattaggagttcttcgtaaa
tgcgaatccttttttctatcgtatggcgggcatgatttcgctgccgggcttatgatcaaa
gaagatcaggtcgagggattcaggaaaaaatttattcatctagtgagttcttctttgaga
aaagatgatgcaatgcgtacgctttccttagatgttgggatggatttctctcgcatcaat
cgggatttaattgcttctatggagcttcttgagccttttggaaaagggaatgtatcccca
gtcttctatacaaaagccatacaggtacgttatccaaagttattagccgggaaccatgtc
aaattgtatttgaatagtggggagagaaacttggaggggacggctttcggtcagggggat
aagattagtctactcaaagcgaattggaatatacctttggatatcgcctatacgttacgt
attatgaggcggtcggctcgcggagcaattcgtttgttgattcaggattttcgtatacag
attcctcggttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system