KEGG   Chlamydia trachomatis D/SotonD6: SOTOND6_00064
Entry
SOTOND6_00064     CDS       T02561                                 
Name
(GenBank) RNA polymerase sigma factor sigma-28
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ctrt  Chlamydia trachomatis D/SotonD6
Pathway
ctrt02020  Two-component system
ctrt02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ctrt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SOTOND6_00064
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SOTOND6_00064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctrt03021]
    SOTOND6_00064
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ctrt02035]
    SOTOND6_00064
Transcription machinery [BR:ctrt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SOTOND6_00064
Bacterial motility proteins [BR:ctrt02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SOTOND6_00064
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE Sigma70_ECF HTH_10 Phage_CI_repr
Other DBs
NCBI-ProteinID: CCP54027
Position
71743..72504
AA seq 253 aa
MKTHDLADTWQLYWSTKEIHHRDVLIESYLPLVKNVAHRLASGMPSHVKMEDLYALGVEG
LIRAVERFDPEKSKRFESYALFIIKAAIIDGLRKQDWVPRSVYQRANRLADAMDSLRQTL
GKEPTDGELCEYLNISQQELSHWFSSSRPALVLSLHDDFSCQDDDEGLALEERIADERAE
TGYDVIRKKEAISILTEALLALDEKERQVMALYYYDDLVLKEIGKILGVSESRVSQIHSK
ALLKLRGTLSSLL
NT seq 762 nt   +upstreamnt  +downstreamnt
gtgaagactcacgatctcgcagatacttggcagctatattggtcgacaaaagaaatccat
catagggatgttttgatcgaatcctaccttcctttagtaaagaatgtagcgcatcggctt
gcttcaggaatgccttctcatgtaaagatggaagatctttatgctctgggggttgaaggg
ttgattcgtgctgtcgaacgttttgatccagaaaaaagcaagcgattcgagagctatgct
ctttttatcataaaagctgcgattattgatggattgcgcaaacaggattgggtaccacgc
agtgtttatcaaagagccaatcgattagctgatgcgatggattctttgagacagacttta
ggtaaagaacctactgatggagaactttgtgagtatctaaatatttcacaacaagagtta
tcccattggttttcctcctctagacctgctctagttctttctttacatgatgatttctcc
tgccaagatgacgatgaggggcttgctttagaagagcgcatagcagatgagcgagcggaa
accggatacgatgtcatcagaaaaaaagaagctatttctattttgacagaagctttgctg
gctcttgatgaaaaagagcggcaggttatggctctttattactatgatgacttggtatta
aaagaaattgggaagattttaggagtgagcgagtcccgagtttctcagatacactccaaa
gctttattgaagttacgaggtacattgtccagtctgctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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