KEGG   Chlamydia trachomatis A/7249: A7249_00424
Entry
A7249_00424       CDS       T02564                                 
Name
(GenBank) exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
ctrz  Chlamydia trachomatis A/7249
Pathway
ctrz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ctrz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A7249_00424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctrz03019]
    A7249_00424
   03016 Transfer RNA biogenesis [BR:ctrz03016]
    A7249_00424
Enzymes [BR:ctrz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     A7249_00424
Messenger RNA biogenesis [BR:ctrz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A7249_00424
Transfer RNA biogenesis [BR:ctrz03016]
 Prokaryotic type
  tRNA degradation factors
   A7249_00424
SSDB
Motif
Pfam: RNB OB_RNB CSD2 DUF3006
Other DBs
NCBI-ProteinID: CCP49584
Position
456118..458202
AA seq 694 aa
MGKAKNKKKFLKNRKQVLVPGTLFVHSRKGFGFVSPDQPELYPFDIFISASDLKGALDGD
HVLVALPFSLRGGEKRKGVIHKVLSRGKTVLVGTIVSLINPTLAMVCVNTIGPEHPLKAE
LLPKRTYKLGDRLLLKTPVWKENYPSKEPPPLAMLEFIGNISNAKTDFPVIKAEFSITEE
FPDAVVQEASQFLQKHVTQALHSRKDLRDLLCFTIDSSSAKDFDDAVSLTYDHEGNYILG
VHIADVSHYVTPNSALDREAAKRCNSIYFPGKVIPMLPSALSDNLCSLKPNVDRLAVSVF
MTFSKEGFLSDYRILRSVIRSKYRMTYDEVDEIIEKKQTHPISKTILKMAELSRIFSDIR
EQRGCTRLVLPSFTMSLDNLQEPVALIENKQTAAHKLIEEFMLKANEVIAYHISHQGITM
PFRTHEPPNEESLLVFQETAKAMGFTITQTPAQEPDYQYLLQETTAGHPLEPILHSQFVR
SMKTASYSTENKGHYGLCLDYYTHFTSPIRRYVDLIVHRLLFHPLSVEEEHLEQIVRACS
SQERIAAKAEGAFVNIKKARFLKKFIEEQPATLYKAFIITASPEGISFVLPEFCHEGFIP
AAKLPQAYVLQTKIGLEELPEHLRPGAVISVQLASVTLLTQSIEWTLVEATTKAKAKRTS
KKKKTESVTTKEKKKSPAKKKKGATKTKKGSGKN
NT seq 2085 nt   +upstreamnt  +downstreamnt
gtgggaaaagctaaaaacaaaaagaaatttctaaaaaatagaaagcaagttctggttcct
ggtaccttattcgtccattctagaaagggctttggatttgtatccccagatcaaccggag
ttatatccttttgatattttcatctcagctagcgacttaaaaggtgctttggatggagat
catgttctcgtggctctccccttttctcttcgtggaggagaaaaaagaaaaggggtcatt
cataaagttctttctcgaggtaaaacagtcttagtagggactattgtctctcttatcaat
ccaactctagctatggtttgtgtgaataccataggccctgaacatcctttaaaagccgag
ctcttacctaaaaggacttacaaactaggagatcggttgttactaaaaactcctgtgtgg
aaggagaattatcccagtaaagaaccaccccccttggctatgctggaatttataggcaat
atctctaatgctaagacagattttcctgttattaaagctgaattctctattacagaagag
ttccccgatgcagtggtacaggaagctagtcagttcttacaaaagcacgtaacacaagcg
ttacactcgaggaaagatctccgagatttgttatgtttcaccatagactcttcctctgct
aaggactttgacgatgcagtctcactaacttatgatcatgagggaaactatattctaggt
gttcatattgcggacgtctcccactacgtgactccaaattccgctttggatagagaagct
gctaaacggtgcaactcgatctacttccctggaaaagtcatccctatgctgccttcagcc
ctttctgacaatctgtgcagcttaaaacctaatgtggatcgcttagctgtatccgtattt
atgactttctctaaagagggattcctttctgactaccgaattttgcgtagcgtcattcgt
agtaaataccgtatgacatacgatgaggtagatgaaattatcgagaaaaaacagactcac
cctatttctaaaaccattttaaagatggctgaattgagccgtattttttctgacatccga
gaacaacgtggatgcacgcgtctcgttcttccttcattcacgatgtctcttgataattta
caagagcctgtagcccttatcgaaaacaaacaaacagctgctcataaactcattgaagag
tttatgctgaaagcgaatgaagtgatagcctatcacatttcccatcagggaataaccatg
ccattccgcacacatgaacctcctaatgaagaaagtctccttgtgtttcaagagacagca
aaggctatgggcttcaccattacacaaaccccggcgcaagaaccagattaccaatattta
ttgcaggaaacgactgcaggccatcctttggagccaatccttcattctcagtttgtacgc
agtatgaagacggcttcctattctacggaaaacaaaggccattacggtctgtgcttagac
tactacacacactttactagcccgatccgccgatacgtggatttgatcgttcaccgactg
cttttccatcctctctctgtagaagaagagcatcttgaacaaattgttcgagcctgctca
tcccaagaacgcattgcagcgaaagctgagggagcttttgtaaatattaagaaggctcgc
ttcttgaaaaaattcatagaagagcagcctgcaactctttataaagctttcattattacg
gcatccccggaagggatctcttttgtcctcccagaattttgtcatgaaggtttcattcct
gcggctaaactacctcaagcgtacgtccttcaaacaaaaataggattagaagaacttcct
gagcatttgcgtcctggagctgttatttctgtgcaactggcttctgtcaccttgctcaca
cagtctatcgagtggacgttggttgaagccacaactaaagctaaagcaaagcgtacctct
aaaaagaaaaaaacagaatctgtcacgactaaagaaaagaaaaagagtcctgctaaaaag
aaaaaaggagctaccaaaacgaagaagggcagtgggaaaaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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