KEGG T01109: CtCNB1

Comamonas thiooxydans: CtCNB1_2168

Entry

CtCNB1_2168       CDS       T01109

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

ctt Comamonas thiooxydans

Brite

KEGG Orthology (KO) [BR:ctt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctt03009]
    CtCNB1_2168
   03016 Transfer RNA biogenesis [BR:ctt03016]
    CtCNB1_2168
Enzymes [BR:ctt01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CtCNB1_2168
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CtCNB1_2168
Ribosome biogenesis [BR:ctt03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CtCNB1_2168
Transfer RNA biogenesis [BR:ctt03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CtCNB1_2168

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

ACY32914

Position

complement(2470446..2471090)

AA seq 214 aa
MYEDEHLLVLDKPSGLLCVPGRGPDKQDCLSLRALRHFGDALVVHRLDQATSGLVVMARN
PAVQRQLSQAFAERKVDKRYIAVVAGELQAHSEAADDRGWQLIDLPIAADWERRPLRVIN
HETGKSSQTLWQVIEHTVQPGILRTRVLLSPLTGRTHQLRLHMAAIGHPMLGDALYASEA
VACASPRLLLHAAALELVHPVTGGLLQLKSDPLF

NT seq 645 nt +upstreamnt +downstreamnt
gtgtatgaagacgagcacctgctggtgctcgacaagccctcgggcctgctgtgcgtgccc
ggtcgcggccccgacaagcaagactgcctgagcctgcgtgccctccggcatttcggcgat
gcactggtcgtgcaccggctcgatcaggccacatcgggcctggtcgtcatggctcgcaat
ccggccgtccaacgccagctcagccaggcctttgccgaacgcaaggtcgacaagcgctat
atcgccgtagtggccggcgagttgcaggcgcacagcgaagcagcggatgacaggggctgg
caactgatagacctgccgattgcggccgactgggagcgtcggccgctgcgtgtcatcaac
cacgaaaccggcaaaagcagccagacgctgtggcaggtgatcgagcacaccgtccaacca
ggaatactccgcacccgggttttgctgagcccgctgacgggccgcacccatcaattgcgc
ctgcatatggcggccataggccaccccatgctgggcgatgcgctatatgccagcgaagcc
gtggcctgcgccagcccacgcctgttgctgcatgcggcagcactggagctggtgcatccg
gtcaccggcggactgctgcagctaaaaagcgatccacttttttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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