KEGG   Comamonas thiooxydans: CtCNB1_4076
Entry
CtCNB1_4076       CDS       T01109                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ctt  Comamonas thiooxydans
Pathway
ctt02024  Quorum sensing
ctt03060  Protein export
ctt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ctt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    CtCNB1_4076
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CtCNB1_4076
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CtCNB1_4076
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ctt02044]
    CtCNB1_4076
Enzymes [BR:ctt01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     CtCNB1_4076
Secretion system [BR:ctt02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   CtCNB1_4076
  Eukaryotic Sec-SRP protein
   CtCNB1_4076
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA APS_kinase AAA_30 cobW AAA_22 AAA_31 DO-GTPase1 AAA_16 AAA_24 AAA_33 AAA_14 nSTAND3 ABC_tran AAA_18 AAA_19 AAA_17 ResIII TsaE Thymidylate_kin Nse4-Nse3_bdg HTH_Crp_2 ArsA_ATPase YqeC Rad17 KTI12
Other DBs
NCBI-ProteinID: ACY34822
Position
complement(4577414..4578805)
AA seq 463 aa
MASALTDKLSRLVKEMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQEVISSLQPGQVLVSIVNKELAATMGEGVADINLNAQPPAVILMAGLQGAGKTTTTAKL
AKHLIEKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGAEWFPSTPDQKPHDIAVAAIDYAK
KHFFDVLLVDTAGRLAIDELLMAEIKDLHATLKPVETLFVVDAMQGQDAVNTAKAFKEAL
PLTGIVLTKLDGDSRGGAALSVRQITGAPIKFAGVSEKIDGLEVFDADRHAQRVLGMGDI
VALVEQVTKGVDMEAAQKMAEKLKSGDGFDLNDFLAQLQQMKQMGGLSTLMDKLPAELAG
KAGQVDMDKAEREIKRKEGIICSMTFKERKNPALIKATRKKRIADGAGVQVQEVNRLLKE
FEQMQTMMKKFKGGGLMKMMKKMGGMKAMKGMMGGGGMPKLPF
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggcctccgcactcaccgataaactctcgcgccttgtcaaagagatgcgcggccaggcc
cgcatcaccgagtccaatgtgcaggacatgctgcgcgaagtgcgcatggccttgctggag
gccgacgtggccctgcctgtggtgcgcgacttcattgcccgcgtcaaggaaaaggcgctg
ggccaggaagtcatcagctcgctgcagcccggccaggtgctggtgtccatcgtcaacaag
gagttggcggcgaccatgggcgaaggcgtggccgacatcaacctcaatgcccagcctccc
gccgtcattctgatggcgggtctgcaaggggccggcaagaccaccaccacggccaagctg
gccaagcatctgatcgaaaagcgcaagaaaaaggtgctcacggtctcgggtgacgtgtat
cgccctgcggccatcgagcagctcaagaccgtgacggcccaggctggcgccgagtggttt
ccctccacgccggaccagaagcctcacgatatcgccgtggccgcgatcgactacgccaaa
aagcatttcttcgatgtgctgctggtggatacggccggccgtctggccattgacgagctg
ctgatggccgaaatcaaggatttgcacgccacgctcaagcccgtcgaaaccctgttcgtg
gtcgatgccatgcagggccaggatgcggtcaacacggccaaggccttcaaggaagcgctg
ccgctgaccggtatcgtgctgaccaagctcgatggcgattcgcgcggcggtgctgcgctg
tcggtgcgccagatcacgggcgcgcccatcaagttcgccggtgtctcggaaaagatcgac
ggcctggaagtcttcgatgccgaccgccacgcacagcgcgtgctgggcatgggcgacatc
gtggccctggtcgagcaggtcaccaagggcgtggacatggaagccgcgcagaagatggcc
gagaagctcaagagcggtgacggcttcgacctcaacgactttctggcccagctgcagcag
atgaagcagatgggcggtctctcgaccctgatggacaagctgcccgccgagctggccggc
aaggccggtcaggtcgacatggacaaggccgagcgcgagatcaagcgcaaggaaggcatc
atctgctccatgaccttcaaggagcgcaagaaccccgccctgatcaaggccacgcgcaaa
aagcgtattgccgacggcgccggcgtgcaggtgcaggaagtcaaccgcctgctcaaggag
ttcgagcagatgcagaccatgatgaagaagttcaagggcggcggtctgatgaagatgatg
aagaagatgggcggcatgaaggccatgaagggcatgatgggcggcggcggcatgcccaag
ctgccgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (45)   

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