KEGG   Cronobacter turicensis: CTU_06900
Entry
CTU_06900         CDS       T00999                                 
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ctu  Cronobacter turicensis
Brite
KEGG Orthology (KO) [BR:ctu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctu03021]
    CTU_06900 (rapA)
Transcription machinery [BR:ctu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     CTU_06900 (rapA)
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 Flavi_DEAD Helicase_RecD
Other DBs
NCBI-ProteinID: CBA27963
UniProt: C9XVL4
Position
complement(740845..743751)
AA seq 968 aa
MPFTLGQRWISDTESELGLGTVVAIDARMVTLLFPATGENRLYARNDSPVTRVMFNPGDT
VTSHEGWQLKVDEVKEENGLLIYIGTRLDTLEENVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRMPWSGLRGQRTNLIPHQLNIANDVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
ESENPFDTEQLVICSLDFVRRNKQRLEHLCDAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAERVAGVLLLTATPEQLGMESHFARLRLLDPSRFHDFEQFVEEQQNYRPVADAVALLL
AGTHLSDEQLNTLSELIGEQDIEPLLQAANSDRDGAESARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPQRELHTIKLPLPTQYQTAIKVSGIMGARKSAEERARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSVYEQLIGYLAAPENS
EGFDELIQACRKQHDELKAQLEQGRDRLLEIHSNGGEKAQQLADAIAEQDDDTGLVNFAM
NLFDIVGINQDDRGEHMIVLTPSDHMLVPDFPGLPEDGCTITFNRDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSCTISLLKNKALPVGTLLLELIYVVEAKAPKQLQLNRFLPPTP
VRMLLDKSGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQEVHAILQGGEAQVEKAAR
ELIDAARQEADDKLSAELSRLEALRAVNPNIRDDELAAIEHNRQQVLENLNQASWRLDAL
RLIVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcaacgctggatcagcgatacggaaagcgaactgggactgggc
accgtggtagcgatcgacgcccgcatggtgactctgcttttcccggctaccggtgaaaat
cgtctgtatgcccgaaatgactccccggtcacccgcgtgatgttcaacccgggcgatacc
gtgaccagccacgaaggctggcagttgaaagtggatgaagtaaaggaagaaaacggctta
cttatttatatcggcacccgtctggatacgcttgaggaaaatgtcgcgctgcgcgaggtt
ttcctcgacagcaaactggtgttcagcaaaccgcaggaccgcctgttcgccggtcagatt
gaccgtatggaccgcttcgccctgcgctttcgcgcccgcaaataccagagcgaacagtac
cggatgccgtggagcggcctgcgcggtcagcgtactaacctgatcccgcaccagctcaat
atcgccaatgacgtgggccgccgccatgcgccgcgcgtcctgctggccgatgaagtgggc
ctcggtaaaaccatcgaagccggcatgatcattcaccaacagctgctcgcaggcgcggcg
gagcgcgtgctgattgtcgtgccggaaacgctgcaacaccagtggctggtggagatgctg
cgccgcttcaacctgcgcttctcgctgtttgacgacgagcgttacgccgaagcccagcat
gaatccgagaacccgttcgataccgaacagttggttatctgctcgctggatttcgtgcgc
cgcaacaagcagcgccttgagcatctgtgcgatgccgagtgggacctgctggtggtggac
gaagcccatcacctggtctggagcgaagacgcgccgagccgcgaatatcaggccattgaa
cagctggccgaacgcgtggcgggcgtgctgctcctgaccgcgacgccggaacagctcggt
atggagagccatttcgcgcgcctgcgtctgctggacccgagccgtttccacgatttcgaa
cagtttgtcgaagaacagcagaactatcgcccggtggcggatgccgtggcgctgctgctg
gcgggcacgcatctgagcgatgaacagctcaataccttaagcgagctgattggcgaacag
gatatcgagccgctgctgcaagccgccaacagcgaccgcgacggcgccgaaagcgcgcgt
caggagctggtgtccatgctaatggaccgtcacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaaaggcttcccgcaacgcgagctgcacaccattaagctgccgttg
ccgacccagtaccagaccgccattaaagtctccggcattatgggcgcgcgtaaatccgcc
gaggagcgcgcgcgcgatatgctctatccggagcagatttatcaggaatttgaaggcgac
agcggcacctggtggaacttcgatccgcgcgtggagtggctgatgggctatctcaccagc
caccgctcgcagaaagtactggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtactgcgcgagcgtgaaggcattcgcgccgccgtgttccatgaaggcatgtcgatt
atcgaacgcgaccgcgcagcggcctggtttgccgaagaagataccggcgcgcaggtgctg
ctgtgctcggaaatcggctccgaaggccgtaacttccagttcgccagccagctggtgatg
ttcgatctgccgttcaaccccgatctgctggagcagcgtatcggccgtctggaccgtatc
ggccaggcgcacgatatccagatccatgtgccgtaccttgagaaaaccgcgcagtcggtg
ctggtgcgctggtatcacgaggggctggacgcgtttgaacacacctgccctaccggacgc
gcgatttatgacagcgtctatgagcagctgattggctacctggccgcaccggaaaacagc
gagggctttgacgagctgattcaggcgtgccgtaaacagcacgatgaactgaaagcgcag
cttgagcagggccgcgaccgcctgctggagatccactccaacggcggcgaaaaagcccag
cagctggctgatgccatcgctgagcaggatgacgataccggcctggtgaatttcgccatg
aacctgttcgatatcgtgggcatcaatcaggatgaccgcggcgaacatatgattgtgctg
acgccgtccgatcacatgctggtgccggatttccctggcctgccggaagatggctgcacc
attacgtttaaccgcgacgtggcgctgtcgcgcgaagacgcgcagttcattacctgggaa
cacccgcttatccgcaacggtctggatctgatcctctccggcgacaccggcagctgcacc
atttcgctgctgaaaaataaagcgttaccggtcggcacgctgctgctggagctgatttac
gtggtcgaagccaaagcgccgaagcagttgcagcttaaccgcttcctgccgccgacgccg
gtacgcatgctgctcgataaaagcggcaacaatctggcaggccaggtggagtttgaaagc
ttcaaccgccagcttagcgccgtcaaccgtcataccggcagcaagctggtgaacgcggtt
cagcaggaagtccatgcgatcctgcaaggcggcgaggcgcaggtggagaaagcggcgcgc
gagcttatcgatgcggcgcgtcaggaagccgatgacaaactctccgccgagctgtcgcgt
ctcgaagcgctgcgcgccgtgaacccgaacattcgcgacgacgaactggcggcgattgag
cataaccgtcagcaggtcctggagaaccttaaccaggcgagctggcgactggatgcgctg
cgtcttatcgtagtgactcaccagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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