KEGG   Chlamydia trachomatis A2497: CTR_6131
Entry
CTR_6131          CDS       T01707                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cty  Chlamydia trachomatis A2497
Pathway
cty02020  Two-component system
cty02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cty00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CTR_6131 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CTR_6131 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cty03021]
    CTR_6131 (rpoN)
Transcription machinery [BR:cty03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CTR_6131 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_23 DNA_pol3_delta_C HTH_11 Terminase_5
Other DBs
NCBI-ProteinID: CAX09280
UniProt: G4NMQ4
Position
691583..692893
AA seq 436 aa
MLHQHQTASVALCPALHLQQGLDMLQMPVAELATFVSQQITINPCFDLDSLDSPPESFSF
FPISEQHPFTETLSAYLLRQIDTNFASSQERTIAQYIVGNLSPEGLFLENPSLVAADLNV
SEHLFHKVWQRIQQLHPLGVGAPSLQSYWVSLLQTSPHKEALAIIRNHFPRLARCDFTTI
ARKMHATTTEILTFLRHAFASIPWCPAAGFSETLHPPAPALPDAYLSFSRNSSWDVSINK
DCLPSIRLNNTVLDIYPSLPREEKDHLSQQIRAAKQLLRNVKKREETLLAILRVLIPYQE
EFLLKKRTSPKAFSVKQIARELSLHEATVCRAIDNKTLATPVGLLPMRSLFPQAVGSCPD
QSKATILHWIHQWISTEKHPLSDAAISQKIIEKGIPCARRTVAKYRSQLNILPAHQRKHL
CSVLTTTRTENSRHTI
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatcttcaacag
ggactggatatgctacagatgccagttgctgaactcgcaacatttgtgtcccagcaaatc
actatcaatccctgttttgatctcgatagcttagattctcctccagaatctttttcgttt
ttccctattagcgaacagcatccttttacagaaactctatccgcataccttcttcggcaa
attgataccaattttgcctcttctcaggaacgtactatagctcagtatattgtaggcaac
ctctccccagaaggactctttttagaaaatcctagtcttgtggctgcagatttaaacgtc
tccgaacaccttttccacaaggtatggcaacgtatccaacaattacatcctttaggagtc
ggagcgccttccctacagtcctactgggtatcgctactacagacatctccccataaggag
gctttagctattattcgcaaccatttccctagattagctcgttgtgatttcactactatc
gctaggaaaatgcatgcaaccacaacagagattcttacgtttcttagacacgcttttgct
tccatcccttggtgtccagcagcaggcttttccgagacacttcacccccctgctccagcg
cttcctgatgcctacctttccttctcgcgaaactcttcttgggatgtctctattaataaa
gattgtctcccctctattagactcaacaacaccgtactagatatctatccttctcttcct
cgtgaagagaaagaccacctatcgcaacaaatccgagcagcaaaacaattgcttcgcaat
gtaaaaaaacgagaagaaacgttattggctatccttcgagttctcatcccctaccaagaa
gagttccttcttaaaaaacgcacctctcctaaagctttttctgtaaaacaaatagctcgc
gaactctctcttcatgaagctaccgtttgtcgtgccattgataataaaacgttagcaacc
cctgttggattactccctatgcgatcgctatttccacaagcggttggatcctgccccgat
caatctaaagcaactattttgcattggatccaccagtggatttctacagaaaaacatcct
ctatctgatgcagctattagccaaaaaattattgagaagggcatcccctgcgcacgacgc
acagtagccaaatatcgttcgcaactgaatatcctccctgcgcaccaacgcaaacaccta
tgctctgttttaacaacaacacgcacagagaattctcgacatactatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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