KEGG T04562: BJK06

Curtobacterium sp. BH-2-1-1: BJK06_16525

Entry

BJK06_16525       CDS       T04562

Name

(GenBank) DNA topoisomerase IV

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

cub Curtobacterium sp. BH-2-1-1

Brite

KEGG Orthology (KO) [BR:cub00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cub03032]
    BJK06_16525
   03400 DNA repair and recombination proteins [BR:cub03400]
    BJK06_16525
Enzymes [BR:cub01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BJK06_16525
DNA replication proteins [BR:cub03032]
Prokaryotic type
  DNA Topoisomerases
   BJK06_16525
DNA repair and recombination proteins [BR:cub03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BJK06_16525

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C Cas9-BH

Other DBs

NCBI-ProteinID:

AOX67107

Position

complement(3489699..3492185)

AA seq 828 aa
MARTEAVGLPDGERIEDVDVSEEMQGSFLEYAYSVIYSRALPDARDGLKPVQRRILYQMA
EMGLRPDRGHVKSARVTGEVMGKLHPHGDGAIYDALVRMAQPFTMRVPLVDGHGNFGSLD
DGPAAARYTEARLAEPSMAMTEGLGEDVVDFVPNYDNQIMQPGVLPAAFPNLLVNGASGI
AVGMATNMAPHNLGEVVEAAKHLLMNPQATLDELMEFVPGPDLPSGGTIVGLSGVRDAYA
SGRGSFRTRAKVSVENLTPRKVGLVVTELPYLVGPERVIEKIKDGVQSKKLVGISDVNDL
TDRNHGLRLVIGIKSGFNPTAVLEQLYKHTPLEDGFGINNVALVGGSPKTLGLRELLDVY
VQHRLSVVTRRSQYRLARKKERLHLVEGLLIAILDIDEVIEVIRSSDDSEAARSRLQTVF
DLSEVQAEYILELRLRRLTKFSRLELEGERDQLLADIAALEELLASDERLRAQVALELTE
VSDRFATPRRTLLTEADAPVKGGRKAAVDPESLQIADSPCRVLLSTTGRLIRVDIPTSEL
GIVRVPKRSKHDAVRSSVVSSVRGQVGALTSTGRVIRLSPVDVPAVPPAAVRLDAGVRVT
DFLGIARGETVVALVDLSGASSDSLAIGTVQGVVKRVVPGAWPDKPEFPAIGLKPGDAVV
GAAQAPESDDLVFITSNAQLLRFPASGVRAQGLPAGGVAGVALAAGASAIWFGSVARSDD
AVVATVSASSSALPGTDTGRAKVSALSEFPAKGRATQGVRAHAFLKGEDGLTVAWAGIAP
PHAVGSDGAARTLPDWLSKRDGSGAPLDAVIDSIGGSAAALDGTAGEA

NT seq 2487 nt +upstreamnt +downstreamnt
atggcacgcacggaagcagtcggcctgcccgacggtgaacgcatcgaggacgtcgacgtc
tccgaggagatgcagggctccttcctcgagtacgcgtactccgtcatctactcacgggca
ctccccgacgcacgcgacggcctgaagcccgtgcagcggcgcatcctctaccagatggca
gagatggggctccggcccgaccgcggccacgtgaagagcgcccgcgtcaccggcgaggtg
atgggcaagctgcacccgcacggcgacggcgcgatctacgacgccctcgtgcgcatggcg
cagccgttcacgatgcgcgtgccgctcgtcgacggacacggcaacttcggctcgctcgac
gacggtcccgcggccgcccgatacaccgaggcccgcctcgccgagccgtcgatggccatg
accgagggcctgggcgaggacgtcgtcgacttcgtcccgaactacgacaaccagatcatg
cagccgggcgtgctgcccgcggccttcccgaacctgctcgtcaacggcgcgtcgggcatc
gcggtcggcatggcgacgaacatggcgccgcacaacctcggcgaggtggtcgaggcggcg
aagcacctgctcatgaacccgcaggcgacgctcgacgagctgatggagttcgtgccgggc
cccgacctgccctccggcggcaccatcgtcgggctctccggcgtgcgcgacgcctacgcc
agcggtcgcggctcgttccggacgcgcgcgaaggtgagcgtcgagaacctcaccccgcgc
aaggtcggcctcgtggtcaccgagctgccgtacctggtcggcccggaacgcgtgatcgag
aagatcaaggacggcgtccagtcgaagaagctcgtcggcatctccgacgtgaacgacctg
accgaccgcaaccacgggctccggctcgtcatcggcatcaagagcggcttcaacccgacc
gccgtgctcgaacagctgtacaagcacaccccgctcgaggacggcttcggcatcaacaac
gtcgcgctggtcggcggatcgcccaagaccctcgggctgcgcgagctgctcgacgtctac
gtgcagcaccggctctcggtcgtcacacgtcggtcgcagtaccgtctcgcacgcaagaag
gagcgactgcacctggtcgaggggttgctgatcgcgatcctcgacatcgacgaggtcatc
gaggtcatccgctcctcggacgactccgaggccgcgcgctcccgcctgcagacggtgttc
gacctgtccgaggtgcaggccgagtacatcctcgaactgcggctccggcgcctgacgaag
ttctcacgcctcgagctcgagggcgagcgcgaccagctgctcgccgacatcgccgcgctc
gaggaactgctcgcgtccgacgagcggctccgtgcccaggtcgcgctcgagctcaccgag
gtgtccgaccggttcgcgacgccgcgccggaccctgctcaccgaggccgacgccccggtc
aagggtggtcgcaaggccgcggtcgacccggagtccctgcagatcgccgactccccgtgc
cgcgtgctgctctcgaccaccgggcggctcatccgcgtcgacatcccgacgtccgagctc
ggcatcgtccgggtgccgaagcggtccaagcacgacgccgtccgttcgtcggtcgtcagt
tcggtgcgtgggcaggtcggggcgctcacctcgaccgggcgcgtgatccggctctccccc
gtcgacgtccccgccgtgccgccagccgcggtccggctcgacgccggcgtccgcgtgacg
gacttcctcggcatcgcccgcggcgagaccgtggtcgccctcgtcgacctctccggcgcc
tcgtcggactcgctcgccatcggcaccgtgcagggcgtcgtgaagcgcgtcgtgcccgga
gcctggccggacaagcccgagttccccgccatcgggctgaagcccggcgacgcggtcgtc
ggtgccgcccaggcgcccgagtcggacgacctggtgttcatcacctcgaacgcgcagctg
ctgcggttcccggcgtccggcgtccgtgcgcagggcctccccgccggtggggtcgccggc
gtggccctcgcagcgggtgcctcggcgatctggttcgggtctgtcgcccgctccgacgac
gccgtggtcgcgaccgtctcggcgtcgtcctcggccctgcccggcaccgacaccggccgc
gccaaggtctcggccctgtcggagttcccggcgaagggccgtgcgacccagggtgtccgg
gcgcacgcgttcctcaagggcgaggacggcctgacggtggcgtgggcgggcatcgctccc
ccgcacgcggtcgggtcggacggcgctgcccggacgctgccggactggctgtcgaagcgc
gacgggtcgggggcgccgctcgacgccgtgatcgactcgatcggtgggagtgcggcggcg
ctcgacggcaccgccggcgaggcgtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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