KEGG   Cupriavidus necator NH9: BJN34_01025
Entry
BJN34_01025       CDS       T05121                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
cuh  Cupriavidus necator NH9
Pathway
cuh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cuh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJN34_01025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cuh03400]
    BJN34_01025
Enzymes [BR:cuh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BJN34_01025
DNA repair and recombination proteins [BR:cuh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BJN34_01025
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AQV92477
UniProt: A0A1U9UJ65
Position
1:complement(214680..215456)
AA seq 258 aa
MLRIISANLNGIRSASKKGFFDWMGKQDADMVCVQELKAQAADMTEAFLAPHGYHGYFHY
AEKKGYSGVGLYTRHKPERVVTGFGIPEFDNEGRYVEVQYPHLAVISVYVPSGSSGEERQ
QAKFRFMEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIG
ELFDTHGYVDVFRKLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLATPKIAATAHLCSIYK
DEKFSDHAPLSIDYDFPL
NT seq 777 nt   +upstreamnt  +downstreamnt
atgttacggattatcagcgccaacctcaacggcatccgctccgcgtcgaaaaagggcttt
ttcgactggatgggcaagcaggacgcagacatggtctgcgtgcaggaactgaaggcgcag
gccgccgacatgacggaagcgttccttgcgccacatggctaccacggttatttccattac
gccgagaagaagggctatagcggggtgggcctctacacgcgccacaagcccgagcgcgtg
gtcaccggcttcggcatccccgagttcgacaacgaaggccgctatgtggaagtgcagtac
ccgcacctggcggtgatctcggtgtacgtgccgtccggctccagcggcgaggaacgccag
caggccaagttccgcttcatggaggccttcctgccccacctgctgcaactgaaggcaagc
gggcgcgagatcgtgctgtgcggcgacgtcaacatcgcgcacaaggaaatcgacatcaag
aactggaagggcaacctgaagaactcaggcttcctgcccgaggaacgtgcgtggatcggc
gaactgttcgatacccacggctacgtcgacgtgttccgcaaactggatccgcgccccgag
caatacacgtggtggagcaaccgcggccaggcttatgccaagaacgtcgggtggcgcatc
gattaccacctggccacgccgaagatcgccgccaccgcgcacctgtgctcgatctacaag
gacgagaagttcagcgaccacgcgccgctgtcgatcgactacgacttcccgctctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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