KEGG   Corynebacterium ulcerans BR-AD22: CULC22_00371
Entry
CULC22_00371      CDS       T01549                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cul  Corynebacterium ulcerans BR-AD22
Pathway
cul03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CULC22_00371 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cul03021]
    CULC22_00371 (rpoC)
   03400 DNA repair and recombination proteins [BR:cul03400]
    CULC22_00371 (rpoC)
Enzymes [BR:cul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CULC22_00371 (rpoC)
Transcription machinery [BR:cul03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CULC22_00371 (rpoC)
DNA repair and recombination proteins [BR:cul03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CULC22_00371 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AEG83089
Position
408964..412731
AA seq 1255 aa
MTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITGVDE
EARHSDQTTLEAEMLLEKKDVEADAESEIAERAQKLEEDLAELEAAGAKADARNKVQKAA
DKEMQHIRERAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAI
QTLIRNFDLDAEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIP
PELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDLGAPEIIVNNEKRMLQESVDAL
FDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHEC
GLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRA
PTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLA
SNNILSPASGKPLAMPRLDMVTGLYYLTMDKTEDEIGGQGAYQSATETGPATGVYSSYAE
ALMARDRGVLGLQAKIQVRISHLRPPTDVEAEQFPEGWEQGQTWLADTTLGRIMFNELLP
WNYPYLEGVMVRKGGGSNKILLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTI
TMSDVLVLPNKEEILDRYEAEAAKIERKYWEQGALTERERYDRLVELWKEATDEVGNAVE
KLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYF
NNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPLAVEVKDAQG
NVTGYTGHSLIETSVAGRVASVDVKDSEGNVLVPAGENLTDQLIEKLIAAGIAEVKVRSV
LTCQTPTGVCAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDIT
GGLPRVQELFEARVPKNRAPIASVAGTVHLEDEGNFYTLTINPDDGSDVVVYEKLSKRQG
LATVRVPMESNPGAMIERTLSEGDHVNVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQ
DVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGTLVDLSEAKAANAEAIAAGGQ
PAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIP
AGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGASVPLDEAYDL
NT seq 3768 nt   +upstreamnt  +downstreamnt
gtgaccaagtccaaggttcgtcgtgagcgcatgggccacatcgagctggctgcgcctgtg
acccacatttggtacttcaagggcgttccttctcgcctcggctacctattggacctggct
ccaaaggaccttgagcgcatcatctactttgctgccaacatcatcactggtgttgacgag
gaagctcgccacagcgaccagaccactcttgaggcagaaatgcttttggagaagaaggac
gttgaggctgacgcagagtctgagatcgcagagcgcgctcagaagctagaggaagacctt
gccgagctcgaagcagcaggcgcaaaggctgacgctcgcaacaaggtgcaaaaggctgca
gacaaagagatgcagcacatccgcgagcgtgctgagcgtgagatcgaccgtcttgaggag
atctggcagacctttatcaagcttgctcctaagcagatgatcatcgacgagaccatctat
gaagagctcgttgatcgctacgaggattacttcaccggtggtatgggcgcggaggctatc
caaacccttatccgcaacttcgacctcgacgctgaggcagaagagctgcgcgagatcatc
aacaacggcaagggccagaagaagatgcgcgctctcaagcgcctcaaggtcgttgctgca
ttccagcgctcgggcaatgacccagctggcatggtgctcgactgcattccggtgatcccg
ccggagctgcgcccgatggttcagcttgatggtggccgttttgctacctccgacttgaac
gatctctatcgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgatcttggt
gctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtccgtcgacgcgcta
ttcgacaacggccgtcgtggtcgccccgtcactggtcctggcaaccgtcctctgaagtcc
ctgagcgatctgctcaagggtaagcagggtcgtttccgtcagaacctgctgggtaagcgt
gttgactactctggtcgttccgttattatcgttggtccacagctgaagctgcatgagtgc
ggtcttcctaagctcatggctcttgagctcttcaagccgtttgttatgaagcgcctcgtg
gaaaacgattacgcgcagaacatcaagtcggctaagcgcatggttgagcgtcagcgccct
gaggtgtgggacgttctggaagaggcaatttccgagcatcctgtgatgcttaaccgtgca
cctaccctgcaccgcctaggtatccaggccttcgagcctaagctcgtcgagggtaaagct
atccagctgcacccgcttgcctgtgaagccttcaacgccgacttcgacggtgaccagatg
gctgtgcacttgccactgtctgctgaggcgcaggctgaggctcgtatcctcatgcttgct
tctaataacatcctctccccggcatccggtaagccacttgccatgccacgtctggacatg
gtgaccggtctttattacctcaccatggacaagactgaggatgagatcggcggacagggt
gcataccagtctgctaccgaaaccggaccagcaaccggtgtgtactcctcctacgctgag
gctcttatggctcgggaccgtggcgttcttggcctgcaggctaagattcaggtgcgcatt
agccacctgcgtcccccgactgatgtcgaggcagaacagttcccagagggttgggagcag
gggcagacctggttggctgataccacccttggtcgcatcatgttcaacgagctcttgccg
tggaactacccataccttgagggcgttatggtccgtaagggtggcggctccaacaagatt
ctcttgggcgacgtgattaatgacctcgctgcgacctacccgatgattactgtcgcgcag
acgatggacaagatgaaggatgccggtttctactgggcaacccgaagcggcgtgaccatc
accatgtctgacgtgctcgttcttcctaacaaggaagagatccttgaccgctatgaggcc
gaggctgcaaagatcgagcgcaagtactgggagcagggtgctctgactgagcgcgagcgc
tacgaccgtctggttgaactctggaaggaggctaccgacgaggttggtaatgccgtcgag
aagctctatccggacgacaacccgattcctatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactcaaagggtgac
tacatcacccgaccgattaagacttccttccgtgaaggtctgtcggttcttgagtacttc
aacaactctcacggttcgcgtaagggccttgccgataccgctctgcgtaccgctgactcg
ggttacctcacccgtcgtctggtggacgtcgcgcaggacgttatcgtccgcgaggacgac
tgtggcaccaagcagggcattcgtgtcccattggctgtcgaggttaaggatgctcagggc
aacgtcaccggttacaccggacacagcctcatcgagacctctgtcgctggccgtgtggct
tccgtcgacgtcaaggattctgaaggcaacgtcttggtgccggctggtgaaaacctcacc
gaccagctcatcgagaagctcatcgctgcgggtatcgcagaggtcaaggttcgctccgtg
cttacctgccagactccgaccggcgtgtgcgctaagtgctatggcaagtccatggctacc
ggcaagctcgttgatatcggagaagcagtgggtattgtcgctgctcagtccattggtgag
cctggtacccagctgacaatgcgtacgttccaccagggtggtgtcggtggcgacattacc
ggtggtctgcctcgtgttcaggagctcttcgaggctcgtgttcctaagaaccgtgctccg
attgcttctgttgcaggtaccgtccaccttgaggatgaaggcaacttctacaccctcacc
atcaacccagatgatgggtctgatgttgtggtctacgagaagctttctaagcgtcaaggt
ctggctaccgttcgggttcctatggagtccaaccccggtgccatgatcgagcgcaccttg
tcagagggcgaccacgtgaacgtgggcgatcgtctgctgcgtggtcctgctgatccgcat
gacgtacttgaggttcttggccgccgtggtgttgagcagcacctcgtcgacgaggttcag
gacgtttaccgtgcacagggtgtggctatccacgataagcacatcgagatcatcatccga
cagatgctgcgtcgcggaactgttatcgagtccggatcgactgagttcctcccgggcact
ctcgttgatctttcggaggctaaggccgctaacgccgaggctattgccgctggtggtcag
cctgctgagctccgctcggagatcatgggtatcaccaaggcatcgctggctaccgagtcg
tggctgtccgccgcgtccttccaggagaccacacgcgtgcttaccgacgccgccatcaac
aagcggtccgataagctgattggcctcaaggagaacgtgatcatcggtaagctgatcccg
gccggtaccggtatttcccgttaccgcaacatctccgttaagccgactgaggcagcccgc
aatgcggcttactcaatcccgacttatggagactccatctatggcgatgatggctacggt
gagttcaccggtgcctccgtgccgctggatgaggcctacgatctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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