KEGG   Campylobacter ureolyticus: CUREO_1276
Entry
CUREO_1276        CDS       T04021                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cure  Campylobacter ureolyticus
Pathway
cure03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CUREO_1276 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cure03021]
    CUREO_1276 (rpoC)
   03400 DNA repair and recombination proteins [BR:cure03400]
    CUREO_1276 (rpoC)
Enzymes [BR:cure01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CUREO_1276 (rpoC)
Transcription machinery [BR:cure03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CUREO_1276 (rpoC)
DNA repair and recombination proteins [BR:cure03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CUREO_1276 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Peptidase_M23 Apocytochr_F_C
Other DBs
NCBI-ProteinID: AKT91119
UniProt: A0A0K1HGL3
Position
complement(1267100..1271608)
AA seq 1502 aa
MSDFAKIEITENKRPHDFDAVQIQLASPEEIRAWSHGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFEGHRCEKCGVEVTSSKVRRTRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVRMKDLERVLYYEAYIVDNPGDAYYDNENTKKVEKYEVLNEEQYQLLSSR
FYNTGFSAAMGGEVIHKLLSELDLVSIVAELKEAMESTKSEARKKDIIKRLKVVESFLSS
NNKPEWMMITALPVLPAELRPLVSLDGGKFAVSDVNDLYRRVINRNTRLKRLLELDAPEI
IIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVIGPNLKMDQCGLPKTMALELFKPHLIARLQEKGYAATVKQAKKMLDDKAVEVWE
CLEEVVKNYPIMLNRAPTLHKMSIQAFHPVLVDGKAIKLHPLVCAAFNADFDGDQMAVHV
PLSQEAIAECKVLMLSSMNILLPASGKAVCVPSQDMVLGLYYLSLEKENAKGTNKIYSSV
DEVMIAVDSGYLDVHAKIKTMIDSNTVFTTAGRLILKSIIPDFIDEKMWNKILKKKDIAN
LIDQVYEKGGLEVTAKFLDDLKDLGFDWATKAAVSISMADIITPKSKVKYVEEAKKEVKE
IQSQYGVGLLTDSERYNKIIDIWTNTNTKVAREMMNLIENDQSGFNSIYMMADSGARGSA
AQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNVLEYFISTHGARKGLADTALKTANAG
YLTRKLIDVGQNVKITMHDCGTHEGIEIAEITANGALIESLEDRIVGRVLSDDVIDPITN
EILFSQGTLIDAQIAKEITEAGIKAVSIRTPITCKAKKGVCAKCYGINLGEGKMVKPGEA
VGIIAAQSIGEPGTQLTLRTFHVGGTASTEQQDHQILAKSEGFVRYYNIKTYENKGKQIV
ANRRNAAILIVEPKIKASFDGVLEVETSYEDVILTVKSKDKEEKHTIRKHNIAKVNELAG
VSGKIEGKFYLPYKNGDKVTASESIVEIIKEGWHVPGRIPYASEIHIEDGEPISQVTKTS
SSGTLKFYILDGASLTRIRDIKKGYEVKEKGLFVVVADDDDREAARYYIPRTSIVEFDDN
SKVKNGDVIFKPKKNEKIIIAQWDPYSTPIIAEDSGVVSFEGIEPGFSATEQYDELTGQT
RLVVNEYLPQGIKPTISVVTDSKTLTYQIEPKTVIYVSNGQKVALADTLAKTPKAVAKSS
DITGGLPRVSELFEARKPKNAAVIAEIDGVVKFGKALRSKEKIIIESPDGLEVEHTIDKS
LQIQVREGEFVHAGEKLTDGLISSQDVLRILGEKALHQYLISEIQQVYRSQGVAINDKHI
EIIVSQMLRQVSILDSGNTSFIVGDLVSRRKFRAENQRVMKMGGEPAIAEPILLGVTRAA
IGSDSFISAASFQETTKVLTESSISGKFDYLEDLKENVILGKMIPVGTGLYKKDKVKIKS
NK
NT seq 4509 nt   +upstreamnt  +downstreamnt
atgagtgatttcgcaaaaattgagataactgaaaataaaagacctcacgactttgatgca
gttcaaattcagcttgcaagccctgaagagataagagcttggagtcatggagaagtaaaa
aaacctgaaacaataaattatagaactttaaagcctgaaagagatgggcttttttgtgct
aaaatttttggaccaataagggattatgagtgtctatgtggcaaatataaaaagatgaga
tttgaaggacatagatgcgaaaagtgtggtgttgaagtaacaagctctaaagttagaaga
actagaatgggacatattgagctagttactccggttgcacatatttggtatgtaaactca
cttccaagtagaatcggtactcttttaggtgttagaatgaaagatcttgagagagtttta
tattatgaagcttacatagtagataatccaggtgatgcatattacgataatgaaaatacc
aaaaaagttgaaaaatatgaagttttaaatgaagaacaatatcagcttttaagtagtaga
ttttataatacaggctttagtgctgcaatgggtggagaagttatacataagcttttaagt
gagcttgatttagtttctatagttgcagaacttaaagaggctatggagtcaacaaaatca
gaggctagaaaaaaagatattataaaaagattaaaagttgtagagagctttttatcttct
aataataaaccagaatggatgatgataacagctcttccggttttgccagctgagcttaga
cctttggttagtctagatggtggtaaatttgcagtaagcgatgtaaatgatctatataga
agagtaataaatagaaatacaaggcttaaaagacttttagaacttgacgctcctgaaata
attataagaaatgaaaaaagaatgcttcaagaagcagttgatgctctttttgataacgga
agacgcgcaaatgctgtaaaaggagcaaacaaaagacctttaaaatctttaagtgaaatt
ataaaaggaaaacaaggaagatttcgtcaaaatctacttggaaaaagggttgatttttca
ggtcgttcagttattgttattgggccaaatctaaaaatggatcaatgtggtctgccaaaa
actatggcactagagcttttcaagccacatttaattgcaagacttcaagaaaaaggatat
gctgcaactgtaaagcaagctaaaaaaatgcttgatgataaggcagttgaagtttgggaa
tgcttagaagaggttgttaagaactatcctatcatgctaaaccgtgctccaacacttcac
aaaatgtcaattcaagcctttcacccagtattggttgatggaaaagcgataaagcttcac
ccacttgtttgtgctgcttttaacgctgactttgatggagatcaaatggctgttcacgtg
ccactttctcaagaagccatcgcagagtgtaaagttttaatgctaagctcaatgaatata
ttacttcctgcaagtggaaaagcagtttgtgttccttcacaagatatggttttaggactt
tattatctatctttggaaaaagaaaatgcaaaaggaacaaataaaatttattcaagcgtt
gatgaggttatgatagctgttgatagtggatatttagatgttcatgcaaaaataaaaact
atgattgattcaaatacagtattcacaacagcaggaagacttattttaaaatcaattatt
cctgattttatagatgaaaaaatgtggaataaaattttaaagaaaaaagatattgcgaat
ttaattgatcaagtttatgaaaagggcgggcttgaagtaacagcaaaattcttagatgat
ttaaaagatctaggatttgactgggctacaaaggctgcagtaagtatttctatggctgat
ataataactccaaagtcaaaagtaaaatatgtagaagaagccaaaaaagaggttaaagaa
atacaaagtcagtatggcgtaggtcttttaacggatagtgaaagatataacaaaatcatc
gatatatggacaaacacaaatactaaagtcgcaagagagatgatgaatttaattgaaaat
gatcaaagtggattcaactctatttatatgatggcagatagtggagctagaggtagtgct
gcacaaattcgtcagcttgctggtatgagaggacttatggcaaaacctgatggaagtatt
attgaaactccaattacttcaaatttccgtgagggattgaatgtgcttgagtatttcatt
tcaactcacggtgctagaaaaggtcttgcagatactgcgttaaaaactgcaaatgctgga
tatttaacaagaaaactaattgatgttggtcaaaatgttaaaattacaatgcatgattgt
ggaacccatgaaggtattgaaatagctgaaataactgcaaatggtgctttaatagagagc
ttagaagatagaattgttggaagagttttaagtgatgatgtaattgatccaatcacaaat
gaaatacttttttctcaaggtactttaatagatgcacaaattgcaaaagagataacagaa
gctggaattaaagcagtaagcattagaacaccaattacttgtaaagctaaaaaaggtgtt
tgtgcaaaatgttatggaataaatttgggtgaaggtaaaatggtaaaaccaggagaagca
gttggaattattgcagctcaatcaattggtgagccaggaactcagctaacacttagaaca
ttccatgttggtggaacagcctcaacagagcaacaagaccaccaaattctagcaaaaagt
gagggttttgtaaggtattacaatataaaaacttacgaaaacaaaggaaagcaaatagtt
gcaaatagaagaaatgcggctattttaattgttgaaccaaagataaaagcttcatttgat
ggagttttagaagttgaaacttcatatgaagatgttattttaacagtaaaatcaaaagat
aaagaagaaaaacatactattagaaaacataatattgcaaaagtaaatgagctagcagga
gttagtggcaagatagagggcaagttttatcttccatataaaaatggtgacaaagtaaca
gcttcagaaagtatagttgaaatcataaaagagggttggcacgtcccaggccgtatccca
tatgcaagcgaaattcatatagaggatggtgagcctattagtcaagtaacaaaaactagt
tcaagtggaacacttaaattttatattcttgatggtgcttcacttacaagaattagagat
attaaaaaaggttacgaagtaaaagaaaaaggtctttttgtggtagttgctgatgatgat
gatagagaagccgcaagatattatatccctagaacttctattgttgaatttgacgataat
agcaaagtaaaaaatggtgatgttatatttaaacctaagaaaaatgaaaaaatcataata
gctcagtgggatccatattcaactccaattattgcagaagatagtggtgttgtaagtttt
gagggaattgagccgggatttagtgcaactgagcagtatgacgagcttacaggacagact
cgtttagttgtaaatgagtatttgccacaaggtataaagccaactattagtgttgttact
gatagcaaaactctgacttatcaaatagagccaaaaactgttatttatgtatcaaatggg
caaaaagtagctttggccgatactttagcaaaaactccaaaagccgtagcaaaatcaagc
gatattactggaggtcttccaagggttagtgagctttttgaagctagaaaaccaaaaaat
gcagctgttatagctgaaattgacggtgttgttaaatttggaaaggcacttcgttcaaaa
gaaaagattattattgaatctcctgatggtcttgaggttgaacatacaattgataaatct
cttcaaatccaagtaagagaaggtgagtttgttcatgctggtgaaaagttaactgatgga
ctcataagcagccaagatgttcttagaattttaggtgaaaaagcacttcatcaatatcta
ataagtgagattcaacaagtttatagaagccaaggtgttgctattaatgacaaacatatt
gagattattgtttctcaaatgttaagacaagttagtattttagatagtggaaatacaagc
tttattgtaggagatttggtaagtaggcgtaaatttagggctgagaaccaaagagttatg
aaaatgggtggtgagccagctattgcagagcctattttacttggtgttacaagagcggct
attggaagcgatagttttatttcagctgcatctttccaagaaaccaccaaagttttaaca
gagtcaagtatttctggtaaatttgactatctagaagatttaaaagaaaatgttatttta
ggaaagatgattcctgttggaacaggactttataaaaaagataaagttaaaataaaatct
aataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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